Timothy Ravasi

This study identifies miRNAs involved in transgenerational thermal plasticity in coral reef fish, showing that parental temperature exposure affects offspring miRNA-mRNA networks differently based on parent type.

This study examines shifts in holobiont communities of Palythoa tuberculosa under high-pCO2 conditions at Iotorishima Island, finding reduced Symbiodiniaceae diversity and altered bacterial profiles.

This study shows that parental exposure to ocean acidification reprograms offspring tissue transcriptomes, enhancing their acclimation to elevated CO2 levels through tissue-specific transcriptional changes.

The paper identifies neural molecular mechanisms in wild cleaner fish during mutualistic interactions, finding genes related to learning, memory, and feeding behavior.

This study examines how parental developmental temperature affects offspring thermal acclimation in coral reef fish, finding that parental experience enhances offspring response to warming, but prolonged heat stress reduces species persistence.

This study shows that parental thermal experiences shape offspring transcriptomic profiles through epigenetic and metabolic mechanisms, with congruent parental exposure enhancing acclimation to warming.

This paper presents a high-quality chromosome-scale genome assembly of the yellowtail clownfish Amphiprion clarkii and identifies a potential link between erbb3b gene copy number and melanism polymorphism.

This paper presents a high-quality chromosome-scale genome assembly for the false clownfish, along with gene annotations and comparative genomic analysis revealing lineage-specific elements.

The paper examines molecular changes in Arabian pupfish during salinity acclimation, identifying both transient and long-term gene expression responses in different populations.

This study creates and validates a spectral library for proteome analysis in a non-model coral reef fish using SWATH-MS, demonstrating its utility for detecting environmental stress responses.

This study shows AGO1 and NEAT1 lncRNA maintain 3D chromatin architecture by regulating TADs and A/B compartments in human cells.

This paper presents a chromosome-scale genome assembly for the orange clownfish, providing a valuable resource for studying reef fish ecology and evolution.