Etthel M. Windels

The paper estimates within-host mutation rates of ESBL-producing E. coli and K. pneumoniae using phylodynamic models on longitudinal genomic data from hospitalized patients.

The paper uses genomic data and phylodynamic models to show that Mycobacterium tuberculosis lineages have similar infectiousness durations but differ in onset timing, affecting transmission dynamics.

This study uses genomic data and a Bayesian phylodynamic model to show HIV co-infection reduces Mycobacterium tuberculosis transmissibility in sub-Saharan Africa.

This study isolates persisters using cephalexin-induced filamentation and shows that persister awakening is stochastic at the single-cell level.