Author
University of Colorado AnschutzORCID 0000-0003-3969-6597Unclaimed ORCID profile · follow to get notified of new preprints
4 papers
Recent·Most cited
Tusharkanti Ghosh, Ryan Michael Baxter, Souvik Seal…·Debashis Ghosh
cytoKernel assesses differential expression in single-cell data by using kernel embeddings to detect both aggregate and subtle variations, outperforming existing methods.
Patrick J. Danaher, Nicholas Hasle, Elizabeth Dong Nguyen…·Shaun W. Jackson
This study uses single cell spatial transcriptomics to analyze kidney tissue from childhood-onset lupus nephritis patients, revealing spatial interactions between immune cells and kidney stroma.
Mansooreh Ahmadian, Christian Rickert, Angela D. Minic…·Kimberly Rae Jordan
The paper introduces a platform-independent preprocessing framework for multiplex tissue imaging data to improve cross-platform consistency and reliability.
Pratyaydipta Rudra, Ryan Michael Baxter, Elena W.Y. Hsieh, Debashis Ghosh
The paper introduces CODAK, a method for analyzing compositional mass cytometry data to test associations with predictors, showing good performance on small samples and applied to SLE data.