Author

Hirokazu Chiba

Research Organization of Information and SystemsORCID 0000-0003-4062-8903Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Molecular Biology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:database / resource· 2 Approach:statistical model· 2 Approach:experimental assay· 1 Organism:mouse· 1 Organism:plant (other)· 1 Assay:protein sequence· 1

Frequent Co-Authors

Hidemasa U. BonoiD· 2 shared Akiya JourakuiD· 1 shared Ana Claudia SimaiD· 1 shared Christophe DessimoziD· 1 shared Frederic BastianiD· 1 shared Hideki SezutsuiD· 1 shared Hiromasa OnoiD· 1 shared Hiroshi MasuyaiD· 1 shared

Activity by Year

2023-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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2 shared papersPlant Biology

Hidemasa U. BonoORCID

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3 papers

Recent·Most cited

Plant BiologyPlant BiotechnologyPeer-reviewedAug 25, 2024

Triterpene RDF: Developing a database of plant enzymes and transcription factors involved in triterpene biosynthesis using the Resource Description Framework

Keita Tamura, Hirokazu Chiba, Hidemasa U. Bono

The paper develops Triterpene RDF, a manually curated database of plant enzymes and transcription factors involved in triterpene biosynthesis, to improve functional annotation of genomes and transcriptomes.

2 citations

plant (other)protein sequence

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Molecular BiologybioRxivPreprintMar 2, 2024

Time-course transcriptome data of silk glands in day 0-7 last-instar larvae of Bombyx mori (w1 pnd strain)

Yudai Masuoka, Akiya Jouraku, Takuya Tsubota…·Kakeru Yokoi

The paper provides time-course transcriptome data of silk glands in Bombyx mori larvae from day 0 to 7, supporting molecular biology and genetic research.

DOI 10.1101/2024.03.02.582034

bulk RNA-seqstatistical model

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BioinformaticsbioRxivPreprintAug 30, 2023

Exploring Disease Model Mouse Using Knowledge Graphs: Combining Gene Expression, Orthology, and Disease Datasets

Tatsuya Kushida, Tarcisio Mendes de Farias, Ana Claudia Sima…·Hiroshi Masuya

The paper integrates multiple biological datasets to explore disease-related genes and bioresources using SPARQL queries, identifying relevant genes and anatomical parts for Alzheimer's and melanoma research.

2 citations

mousebulk RNA-seq

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