Author

Jacob E. Stump

University of CincinnatiORCID 0000-0003-4080-2799Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:protein folding & dynamics· 1 Assay:protein structure· 1 Approach:statistical model· 1

Frequent Co-Authors

Amanda C. MackeiD· 1 shared Jamie Rowley· 1 shared Maria S. KellyiD· 1 shared Ruxandra I. DimaiD· 1 shared Sarah MulleniD· 1 shared Vageesha Herath· 1 shared

Activity by Year

2024-2024 · peak 1/yr

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1 shared paperBiophysics

Amanda C. MackeORCID

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1 paper

Recent·Most cited

BiophysicsJournal of Chemical Information and ModelingPeer-reviewedJan 4, 2024

Searching for Structure: Characterizing the Protein Conformational Landscape with Clustering-based Algorithms

Amanda C. Macke, Jacob E. Stump, Maria S. Kelly…·Ruxandra I. Dima

This paper introduces StELa, a clustering method that identifies protein conformational minima more effectively than existing methods like GROMOS and CATS.

4 citations

protein structuredeep learning

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