Author

H. Troy Ghashghaei

North Carolina State UniversityORCID 0000-0003-4306-5712Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Neuroscience· 2 Scientific Communication & Education· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Approach:deep learning· 2 Organism:mouse· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Alon GreenbaumiD· 3 shared Yuheng CaiiD· 3 shared Xuying ZhangiD· 2 shared Caroline A. JohnsoniD· 1 shared Chen LiiD· 1 shared Chen LiiD· 1 shared Christine V. Mennicke· 1 shared David W. ThreadgilliD· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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3 shared papersNeuroscience

Alon GreenbaumORCID

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3 papers

Recent·Most cited

Scientific Communication & EducationIntelligent ComputingPeer-reviewedJan 1, 2024

Enhancing Light-Sheet Fluorescence Microscopy Illumination Beams through Deep Design Optimization

Chen Li, Mani Ratnam, Yuheng Cai…·Alon Greenbaum

This paper optimizes light-sheet fluorescence microscopy illumination beams using deep learning to improve cell detection performance.

8 citations

imagingdeep learning

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NeuroscienceiSciencePeer-reviewedFeb 20, 2023

Bulk and Mosaic Deletions of Egfr Reveal Regionally Defined Gliogenesis in the Developing Mouse Forebrain

Xuying Zhang, Guanxi Xiao, Caroline A. Johnson…·H. Troy Ghashghaei

This study investigates the role of EGFR in mouse forebrain development through bulk and mosaic deletions, revealing region-specific effects on glial lineage formation.

14 citations

mousebulk RNA-seq

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NeurosciencebioRxivPreprintDec 6, 2022

COMBINe: Automated Detection and Classification of Neurons and Astrocytes in Tissue Cleared Mouse Brains

Yuheng Cai, Xuying Zhang, Chen Li…·Alon Greenbaum

COMBINe automates detection and classification of neurons and astrocytes in cleared mouse brains using RetinaNet to analyze MADM-based genetic modifications.

1 citation

mousespatial transcriptomics

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