Author

Sarah Kinkley

Max Planck Institute for Molecular GeneticsORCID 0000-0003-4997-4749Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Biochemistry· 1

Signature Assays, Organisms & Methods

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Assay:ChIP-seq· 2 Research Focus:chromatin & epigenetic regulation· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Organism:Drosophila· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Martin VingroniD· 2 shared Alexandra K. KiemeriD· 1 shared Alisa FuchsiD· 1 shared Anja Römer-Hillmann· 1 shared Anna RamischiD· 1 shared Anuroop Venkateswaran VenkatasubramaniiD· 1 shared Axel ImhofiD· 1 shared Beate Czepukojc· 1 shared

Activity by Year

2014-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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2 shared papersBioinformatics

Martin VingronORCID

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3 papers

Recent·Most cited

BiochemistryeLifePeer-reviewedMay 8, 2024

The role of RNA in the maintenance of chromatin domains as revealed by antibody mediated proximity labelling coupled to mass spectrometry

Rupam Choudhury, Anuroop Venkateswaran Venkatasubramani, Jie Hua…·Axel Imhof

The paper introduces AMPL-MS to study chromatin domains in Drosophila, showing RNA's role in maintaining their proteomic composition.

5 citations

Drosophilaproteomics

𝕏 PostBluesky

BioinformaticsGenome biologyPeer-reviewedNov 7, 2019

CRUP: A comprehensive framework to predict condition-specific regulatory units

Anna Ramisch, Verena Heinrich, Laura V. Glaser…·Martin Vingron

CRUP predicts condition-specific regulatory units by analyzing histone modification ChIP-seq data and linking enhancers to target genes in rheumatoid arthritis.

32 citations

𝕏 PostBluesky

BioinformaticsNucleic Acids ResearchPeer-reviewedNov 20, 2014

Inference of interactions between chromatin modifiers and histone modifications: from ChIP-Seq data to chromatin-signaling

Juliane Perner, Julia Lasserre, Sarah Kinkley…·Ho-Ryun Chung

The paper infers interactions between chromatin modifiers and histone modifications from ChIP-Seq data, identifying known and novel interactions that contribute to understanding chromatin-signaling networks.

DOI 10.1093/nar/gku1234

ChIP-seqstatistical model

𝕏 PostBluesky