Author

Yue Wu

Centre National de la Recherche ScientifiqueORCID 0009-0004-6801-9899Unclaimed ORCID profile · follow to get notified of new preprints

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Yue Wu5 papers · Chinese Academy of Sciences

Biology Disciplines

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Genomics· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Assay:ChIP-seq· 2 Research Focus:database / resource· 2 Research Focus:differential expression· 2 Assay:DNA methylation· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Organism:Drosophila· 1

Frequent Co-Authors

Leı̈la TirichineiD· 3 shared Eric ManirakizaiD· 2 shared Timothée ChaumieriD· 2 shared Agnès GroisillieriD· 1 shared Alaguraj VeluchamyiD· 1 shared Bérangère LombardiD· 1 shared Bruno JesusiD· 1 shared Damarys LoewiD· 1 shared

Activity by Year

2021-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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3 shared papersGenomics

Leı̈la TirichineORCID

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3 papers

Recent·Most cited

GenomicsISME CommunicationsPeer-reviewedJan 1, 2024

Genome wide assessment of genetic diversity and transcript variations in 17 accessions of the model diatom Phaeodactylum tricornutum

Timothée Chaumier, Feng Yang, Eric Manirakiza…·Leı̈la Tirichine

The paper assesses genetic and transcriptomic diversity in 17 Phaeodactylum tricornutum accessions, revealing increased genetic diversity and novel clades, while showing no link between sampling year and diversity loss.

20 citations

DNA methylationbulk RNA-seq

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BioinformaticsScientific ReportsPeer-reviewedMay 23, 2023

PhaeoEpiView: An epigenome browser of the newly assembled genome of the model diatom Phaeodactylum tricornutum

Yue Wu, Timothée Chaumier, Eric Manirakiza…·Leı̈la Tirichine

The paper introduces PhaeoEpiView, an epigenome browser for the updated genome of Phaeodactylum tricornutum, integrating DNA methylation and histone modifications for better biological interpretation.

17 citations

DrosophilaDNA methylation

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GenomicsGenome biologyPeer-reviewedJan 4, 2021

Histone modifications during the life cycle of the brown alga Ectocarpus

Simon Bourdareau, Leı̈la Tirichine, Bérangère Lombard…·Jeremy Mark Cock

The paper identifies 47 histone PTMs in the brown alga Ectocarpus, including a novel mark, and shows their stable patterns through the life cycle and association with gene expression.

60 citations

E. coliChIP-seq

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