Author

Siyuan Wei

University of CambridgeORCID 0009-0006-6901-7240Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 2 Approach:experimental assay· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:host-pathogen & immune response· 1

Frequent Co-Authors

Sebastian Eves‐van den AkkeriD· 3 shared Anika DammiD· 2 shared Beatrice Senatori· 2 shared Clément PellegriniD· 2 shared Kerry Vermeulen· 2 shared Lida DerevninaiD· 2 shared Olaf Prosper KranseiD· 2 shared Thomas J. BaumiD· 2 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersPlant Biology

Sebastian Eves‐van den AkkerORCID

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3 papers

Recent·Most cited

PathologybioRxivPreprintAug 18, 2026

3D printing and deep learning enable holistic and dynamic analyses of tens of thousands of parasites infecting hundreds of genotypes

Siyuan Wei, Jie Zhou, Olaf Prosper Kranse…·Sebastian Eves‐van den Akker

This study uses 3D printing and deep learning to analyze parasite dynamics across hundreds of plant genotypes, identifying host genetic control of parasite traits and new QTLs.

DOI 10.64898/2026.08.13.744426

Arabidopsisimaging

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Plant BiologyScience AdvancesPeer-reviewedJul 30, 2025

A trehalase-derived MAMP triggers LecRK-V-mediated immune responses in Arabidopsis

Erika Iino, Yasuhiro Kadota, Noriko Maki…·Ken Shirasu

The paper identifies trehalase-derived peptides as MAMPs that trigger LecRK-V-mediated immune responses in Arabidopsis, enabling broad-spectrum pathogen detection.

6 citations

Arabidopsisproteomics

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Plant BiologyPLoS PathogensPeer-reviewedJul 29, 2024

The origin, deployment, and evolution of a plant-parasitic nematode effectorome

Beth Molloy, Dio S. Shin, Jonathan Long…·Sebastian Eves‐van den Akker

This study identifies and characterizes the effectorome of the plant-parasitic nematode Heterodera schachtii, revealing 659 effector gene loci and providing insights into their origin, deployment, and evolution.

33 citationstop 2%

plant (other)bulk RNA-seq

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