TP53 Intron Derived Concentrations Implicate p53
Kevin Bermeister, Jonathan Dyne, Xinghao YuiD, Liran CarmeliD, Khens Kermesh, Adam Bermeister, Mark KoniD, Daniel Shnier
Abstract
Introduction Introduction Background Mechanisms of p53 Regulation... Relative Concentration Dynamics ... Method TP53 intronic half-sites... ID Gene-Transcript-Intron... Conclusion References TP53 is a highly studied gene due to its important regulatory role in DNA, RNA (Marcel, Catez, and Diaz 2015), disease and the progression of cancer. TP53 functions as a tumor suppressor and has been described as the \"Guardian of the Genome\". p53, the protein coded by TP53 predominantly binds regulatory response elements (\"RE\") in introns of multiple target genes. We compared identical subsequences in introns of multiple gene/transcripts including TP53, BRCA1, menl, PELP1, SET, HIF1A, ULBP1/2 and IRF3. Some identical subsequences also contain the ...
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 0
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- A G-Quadruplex Containing First Intron Harbors a Functional Polyadenylation Signal in TP53
IREM CEMILE EROGLU, IREM GOLLER, … AYSE ELIF ERSON-BENSAN·bioRxiv·Nov 11, 2026
- Locally acting transcription factors are required for p53-dependent cis-regulatory element activity
Allison N. Catizone, Gizem Karsli Uzunbas, … Morgan A. Sammons·Nucleic Acids ResearchPeer-reviewed·Feb 26, 2020
- Context dependent activity of p63-bound gene regulatory elements
Abby A. McCann, Gabriele Baniulyte, … Morgan A. Sammons·bioRxiv·May 9, 2024
- 3'UTR-dependent dynamic changes in TP53 mRNA localization regulate p53 tumor suppressor activity
L. Hu, S. Misra, … P. F. Johnson·bioRxiv·Apr 4, 2022
- Endogenous p53 expression in human and mouse is not regulated by its 3'UTR
S. Mitschka, C. Mayr·bioRxiv·Nov 23, 2020
- p53motifDB: integration of genomic information and tumor suppressor p53 binding motifs
Gabriele Baniulyte, Sawyer M Hicks, Morgan A. Sammons·DatabasePeer-reviewed·Jan 1, 2025