Phasor analysis of RGB camera data enables fluorescence microscopy unmixing and brightfield segmentation in a commercial microscope
Bruno Schuty, Maria Jose Garcia, Satya Khuon, Leonel S. Malacrida
1,000+ papers
Bruno Schuty, Maria Jose Garcia, Satya Khuon, Leonel S. Malacrida
Ava E D Kelly, John S. H. Danial
This paper demonstrates that RGB cameras can effectively classify up to six fluorophores in SMLM with high precision, offering a cost-effective alternative to spectral imaging.
Kazuki Kasai, Kayo Imamura, Masatoshi Uno…·Hidehito Tochio
This study reveals the structural mechanism of MyD88 oligomerization in innate immune signaling using cryo-EM and high-speed AFM.
Elias Kluiszo, Rasel Ahmmed, Berna Aliu…·Ulaş Sunar
The paper evaluates a laparoscopic fluorescence imaging platform to quantify light-triggered drug release in cancer models, showing strong correlation with standard measurements and potential for guided treatment.
Matthew J. Tarchick, Franklin S. Caval-Holme, Benjamin E. Smith…·Marla B. Feller
The paper adapts a two-photon microscope to detect both visible and near-infrared fluorescence, enabling simultaneous dopamine and calcium imaging in the retina.
Marco Locarno, Qiangrui Dong, Marco Post…·Daan Brinks
This study demonstrates plasmonic enhancement of protein function in living cells by coupling designed nanoparticles to Archaerhodopsin proteins, increasing fluorescence and response speed.
Julian Falckenhayn, Vi Quint Duong, Neeraj Prabhakar…·Rainer Kaufmann
This paper introduces VULCROM, a vacuum-free cryogenic fluorescence microscope that enables high-resolution cryo-SR-CLEM and detailed single-molecule studies in vitrified specimens.
Wei-Hong Yeo, Emma Freeman, Alexander B. Willis…·Sui Huang
This study examines the dynamic interactions between nucleoli and centromeres in living cells, showing that centromeres move and associate with nucleoli during interphase, with these interactions dependent on rDNA transcription and nucleolar integrity.
Elizaveta Loseva, Aniruddha Mitra, Daniël Groskamp, Erwin J.G. Peterman
This study shows that β-tubulin isotype TBB-4 in C. elegans cilia uses IFT and diffusion to maintain axoneme integrity, with IFT being critical for steady-state length maintenance.
Katie L. Holland, Sarah E. Plutkis, Brian P. English…·Luke D. Lavis
This paper introduces a series of spontaneously blinking dyes with adjustable duty cycles for improved single-molecule localization microscopy in cells and dense structures.
Simone Coppola, Seamus J. Holden
micromorph is a Python toolkit for measuring bacterial morphology from light microscopy data, offering accurate and flexible analysis with a documented API and napari plugin.
Anushka Kaushik, Jayant B. Udgaonkar
This study investigates how chain entropy affects cooperativity during protein unfolding, showing that inter-chain coupling suppresses heterogeneity and promotes coordinated unfolding.
Shwetha Srinivasan, Xingcheng Lin, Xuyan Chen…·Gabriela S. Schlau‐Cohen
This study shows that the lipid composition of the membrane actively regulates EGFR conformation and signaling, independent of ligand binding, with implications for cancer and normal cell function.
Shuhan Jiang, Anna D. Kashkanova, Hannarae Lee…·Vahid Sandoghdar
This paper introduces iNTA-F, a method combining interferometric nanoparticle tracking analysis with fluorescence detection to characterize nanoparticles with single-molecule sensitivity.
Patrick S. Koenig, Alexander Truong, Hadrien Lehman…·Shahar Sukenik
This study uses live cell FRET microscopy to show that adenovirus E1A's structural ensemble and nuclear/cytoplasmic partitioning change during infection.
Sara de Bragança, Clara Aicart-Ramos, Ángel Rivera-Calzada…·Fernando Moreno‐Herrero
OT-Curtains enables real-time observation of DNA-end interactions using optical tweezers and microscopy, demonstrating applications in DNA repair and telomere biology.
Steven Huysecom, Kiki Schouwstra, Samet Aytekin…·Guillermo Solís‐Fernández
This paper introduces GEM-DDM, a method using genetically encoded nanoparticles and differential dynamic microscopy to measure cytoplasmic viscosity in living cells, showing increased viscosity in aggressive colorectal cancer cells.
Hongyu Zhang, Shujing Chen, Zhuoya Huang…·Zhonghua Zhao
This study investigates how PKA activity in primary cilia regulates the Hedgehog pathway, showing that ciliary PKA specifically modulates the pathway even when cilia are disrupted.
Miguel Cid-Rosas, Michelle E. Grunberg, Alejandro Matía…·Carolina Arias
V-SWITCH is a fluorescent reporter that detects viral infections by switching from OFF to ON fluorescence, enabling live-cell tracking and screening for antiviral strategies.
Lazar Ivanović, Anne-Laure Boinet, Andrea Picco…·Wanda Kukulski
This study investigates how tricalbin domains regulate membrane contact site organization in yeast through lipid binding and curvature sensing.
Eiram Mahera Sheikh, Alaa Tharwat, Constanze Schwan, Wolfram Schenck
CGMD selects a small set of diverse images for fine-tuning pretrained cell segmentation models, achieving performance close to fully supervised methods with minimal annotations.
Falk Schneider, Le A. Trinh, Scott E. Fraser
The paper develops an FCS excitation scan assay to compare fluorescent reporters' brightness and photobleaching in tissue culture and zebrafish embryos, finding mNeonGreen outperforms mEGFP.
Shuangjie Shen, Yinghua Xu, Daniel L. Kober, Jinfan Wang
The paper investigates human mitochondrial translation initiation on leaderless mRNAs, revealing two pathways involving mtIF2 and fMet-tRNAMet, with implications for regulation by mtIF3.
Olga Chambers, Ashley J. Cadby
This study develops and evaluates deep-learning models for amoeba detection in phase-contrast images using annotated datasets and compares their speed and accuracy for real-time applications.
Elias Sabri, Agustín Mangiarotti, Rumiana Dimova
This study maps condensate dielectric permittivity using fluorescence and reveals that membrane interactions depend on permittivity contrast rather than absolute permittivity.
Panyu Fei, Michael Loran Dustin
The paper introduces QuEST immunofluorescence microscopy to quantify TCR signalosome stoichiometries in human T cells, revealing a 1:1 ZAP-70:TCR ratio and CD28 recruitment independent of CD80/CD86.
Lenny Reinkensmeier, Sarah Aufmkolk, Irene Farabella…·Mark Bates
This paper introduces COMET, a drift correction method for SMLM that improves resolution and temporal precision, and demonstrates its effectiveness across multiple SMLM techniques.
Adam Harmanec, Alexander D Dagg, Jan Kamenický…·Zuzana Kadlecová
Shape2Fate tracks and classifies exocytic and endocytic carriers in live cells using morphology-aware deep learning, revealing pathway-specific exo-endocytic coordination rules.
Giovanna C. Cavalcante, Alicia Juliana Kowaltowski
The paper presents an open-source code to estimate mitochondrial radial localization from fluorescence microscopy images using various markers.
Varmila Kulasegaram, Daphne Alves Dias, Anna L. Okorokova‐Façanha, Qian Chen
This paper shows curcumin targets the septin ring in fission yeast, delaying cytokinesis and forming a fluorescent ring that co-localizes with septins and the exocyst complex.