Topic · Biomedical Engineering · Engineering
Microfluidic and Bio-sensing Technologies
OpenAlex topic; a paper is listed when OpenAlex scores it at least 0.5 for this topic.
22 papers
Automated High-Throughput Microfluidic Platform for Cell Pairing and Chemical Fusion
Robinzon Silvestre‐De‐León, Everardo Gonzalez‐González, Roberto Rodriguez‐Moncayo, José Antonio Cruz-Cárdenas, Sergio Omar Martinez-Chapa, Joel Voldman B, Mohammad Mahdi Aeinehvand
This paper introduces an automated microfluidic platform for high-throughput cell pairing and chemical fusion, achieving higher efficiency and throughput than previous methods.
bioRxiv · Oct 6, 2026 · PreprintBioengineering
Enriching microlaser-labelled cells by commercial flow cytometry-based cell sorting systems
Matthias König, Tomasz Plaskocinski, Anna Popczyk, Vera M. Titze, Felix Gaedke, Maximilian Germer, Anna‐Lena Schumacher, Annette Monika Schmidt, Marcel Schubert, Malte C. Gather
This paper demonstrates the use of commercial flow cytometry to sort HEK293T cells with controlled numbers of microlaser particles, enabling defined cellular labeling and spheroid formation.
bioRxiv · Oct 5, 2026 · PreprintBioengineering
Passive Cell-Flux Partitioning Enables Single-Cell-Constrained Impedance Sensing From High-Density Microbial Cultures
Woud Alsadoun, Luca Pungan, Yash H. Patel, Juan José Robayo Yepes, Yueying Yang, Rabia Tugce Yazicigil, Miguel Jiménez
This paper introduces a microfluidic chip that enables single-cell-constrained impedance sensing in high-density microbial cultures for real-time monitoring in industrial biomanufacturing.
bioRxiv · Oct 2, 2026 · PreprintBioengineering
Cell-specific heteroclinic orbits govern interaction dynamics in inertial microfluidics for circulating tumour cell separation
Roslyn Hay, Chiara Francesca Ghera, Jian Zhou, Ian Papautsky, Timm Krüger, Benjamin Owen
This study shows that cell-specific heteroclinic orbits and migration rates affect WBC carryover in inertial microfluidics for CTC separation.
bioRxiv · Sep 17, 2026 · PreprintBioengineering
Acoustofluidic Active Flow Sculpting Enables Dynamic, Reconfigurable Cross-Sectional Patterning
Mehmet Akif Şahin, Seyed Mohammadali Hosseinian, Anna Cernina, Linus Eing, Daniel Stoecklein, Jinsoo Park, Ghulam Destgeer
This paper introduces ActiSculpt, an acoustofluidic platform that enables dynamic, reconfigurable cross-sectional patterning of soft materials in continuous flow.
bioRxiv · Sep 12, 2026 · PreprintBioengineering
Label-free Isolation of Heterogeneous Breast Cancer Cell Populations via Insulator-Based Dielectrophoresis
Gürhan Özkayar, Ismene N Usman, Ece Yakın, Jaco Kraan, M. Kristen David, Duco Bosma, John W.M. Martens, Peter ten Dijke, Georg R. Pesch, Pouyan Esmailzadeh Boukany
This paper develops a microfluidic platform using insulator-based dielectrophoresis to isolate breast cancer cells from blood with high recovery and purity.
bioRxiv · Aug 10, 2026 · PreprintCancer Biology
Microfluidic T-Chip enables one-step clinical-scale T-cell purification from blood products for CAR T-cell manufacturing
Maheen Rana, Sophia E. Nigrovic, Adriana Payan-Medina, Sarthak Saha, Victor R. Putaturo, Quinn E. Cunneely, Remy Bell, Ezgi Antmen, Marcela Valderrama Maus, Mehmet Toner, Magdi Elsallab, Avanish Mishra
The paper introduces a microfluidic T-Chip for one-step clinical-scale T-cell purification from blood products, achieving high purity, viability, and recovery of CD3+ T cells for CAR T-cell manufacturing.
bioRxiv · Jul 31, 2026 · PreprintBioengineering
Randomized Spatial Barcoding for Time-Lapse Flow Cytometry
Xiaoyao Chen, Masashi Ugawa, Sadao Ota
The paper introduces RASPBerry, a hydrogel-based spatial barcoding platform for time-lapse flow cytometry, enabling tracking of suspended cells with high accuracy and throughput.
bioRxiv · Jul 22, 2026 · PreprintBioengineering
Hydrodynamic shear enables enrichment of functional tumor antigen-reactive T cells
Prem Santhosh Subramanian, Michelle Fu, Layla C Semaan, Asfa Sultana Sher, Bhupinder S. Shergill, Steven C. George, Venktesh S. Shirure
This paper introduces a microfluidic platform using hydrodynamic shear to enrich antigen-specific T cells, achieving 35-fold enrichment from peripheral blood mononuclear cells.
bioRxiv · Jul 8, 2026 · PreprintBioengineering
Magnetic Levitation of Intact Tumor Biopsies Reveals Multivariate Biophysical Signatures of Breast Cancer Aggressiveness
Meltem Güzelgülgen, Zehra Elif Günyüz, Müge Anıl-İnevi, Devrim Pesen‐Okvur, Betul Bolat Kucukzeybek, Merve Gürsoy, Özden Yalcin-Ozuysal, Gülistan Meşe, Engin Özçivici
This paper applies magnetic levitation to breast cancer biopsies to generate biophysical signatures linked to tumor aggressiveness and clinical subtypes.
bioRxiv · Jun 27, 2026 · PreprintBioengineering
A High-Fidelity 3D Fluid-Structure Interaction Framework for Predictive Microfluidic Design
Lingyue Shen, Yumiao Zhang, Yongxin Chen, Xu Ding, Pinjing Wen, Cheng Wang, Pengtao Sun, Shihua Gong, Jinchao Xu, Jiarui Han, Yan Chen
This paper develops a 3D fluid-structure interaction framework for microfluidic design, validated against experiments to predict particle transport and separation with sub-micron accuracy.
bioRxiv · Apr 30, 2026 · PreprintBioengineering
Rapid and affordable generation of compensation beads for nanoscale flow cytometry
Johann Mar Gudbergsson, Anders Etzerodt
The paper describes a method to rapidly create affordable compensation beads for nanoscale flow cytometry compatible with various antibodies.
bioRxiv · Apr 27, 2026 · PreprintCell Biology
Scaffold-Free Acoustic Levitation Platforms Enable Scalable Culture of Neuronal Spheroids and Assembly of Layered Cortico - Striatal Assembloids
Chloé Dupuis, Guillaume Viraye, Xavier Mousset, Nathan Jeger‐Madiot, Jean‐Luc Aider, Jean‐Michel Peyrin
This paper introduces scaffold-free acoustic levitation platforms for culturing neuronal spheroids and assembling layered cortico-striatal assembloids, showing viability and functional maturation.
bioRxiv · Apr 6, 2026 · PreprintBioengineering
Microfluidic Separation of Adipocytes
Jason Paul Beech, Mathis Neuhaus, Karin G. Stenkula, Jonas Olof Tegenfeldt
This paper develops a microfluidic device for sorting mature adipocytes by size, achieving high recovery, purity, and maintaining hormonal response.
bioRxiv · Mar 9, 2026 · PreprintCell Biology
CellTrap: A Microfluidic Platform Enabling Cell-Cell Interactions at Variable Effector to Target Ratios
Muhammad Zia Ullah Khan, Morteza Hasanzadeh Kafshgari, Ali Bashiri Dezfouli, Oliver Hayden, Gabriele Multhoff, Ghulam Destgeer
CellTrap enables long-term, single-cell analysis of immune-cancer interactions by controlling effector-to-target ratios, showing enhanced immune activity with higher ratios.
bioRxiv · Dec 26, 2025 · PreprintBioengineering
Numerical study of the size-based, shear-induced separation of circulating tumour cells from white blood cells in liquid biopsies
Benjamin Owen, Timm Krüger, Roslyn Hay, Chiara Ghera, Celine Macaraniag, Jian Zhou, Ian Papautsky
This study uses simulations to show that circulating tumour cells enhance white blood cell migration in microfluidic systems, affecting separation efficiency.
bioRxiv · Oct 13, 2025 · PreprintBioengineering
Ridge-assisted Micro Positioning of Cells and Particles in a Microchannel
Adriana Payan-Medina, Victor R. Putaturo, Sajad Razavi Bazaz, Quinn E. Cunneely, Varun Kulkarni, Mehmet Toner, Avanish Mishra
This paper introduces RAMP, a microfluidic method for precisely positioning cell streams in microchannels across a wide flow rate range, independent of particle size.
bioRxiv · Sep 26, 2025 · PreprintBioengineering
Immune Cells Infiltration of Patient Derived Glioblastoma Cells spheroids in Acoustic Levitation in Bulk Acoustic Wave devices
Xavier Mousset, Shuake Kuermanbayi, Dupuis Chloé, Nathan Jeger‐Madiot, Virgile Delaunay, Ahmed Ibdaih, Elias A. El-Habr, Hervé Chneiweiss, Marie‐Pierre Junier, Jean‐Luc Aider, Jean‐Michel Peyrin
The paper describes an acoustofluidic device for creating 3D tumoroids from patient-derived glioblastoma cells and shows immune cell infiltration in these tumoroids.
bioRxiv · Feb 28, 2025 · PreprintBioengineering
Isolation of individual natural killer cells from deep, high-aspect ratio microwell arrays - an evaluative study
Quentin Verron, Niklas Sandström, Hanna van Ooijen, Karolin Guldevall, Karl Olofsson, Thomas Wilhelm Frisk, Björn Önfelt
This study evaluates a microwell system for isolating individual NK cells, demonstrating its viability and potential for functional screening but noting its limited throughput.
bioRxiv · Feb 20, 2025 · PreprintImmunology
3D-Printed Magnetic Levitation Device with Deep Learning-Assisted Particle Tracking and Analysis for High-Throughput Sorting
Malavika Ramarao, Alfa Ozaltin, Sena Yaman, Kaan Ozbozduman, İrem Loç, Nil Ertok, Aria Gao, Mehmet Burçin Ünlü, Naside Gözde Durmus
This paper introduces a 3D-printed magnetic levitation device with automated analysis for high-throughput particle sorting, achieving high accuracy and resolving small density differences.
bioRxiv · Jan 15, 2025 · PreprintBioengineering
Predicting Tumor Mutational Burden from UHF-Dielectrophoresis Crossover Frequency
Héloïse Daverat, Nina Blasco, Sandrine Robert, Arnaud Pothier, Amandine M.F. Rovini, Marie Boutaud, Charlotte Jemfer, Claire Dalmay A, Fabrice Lalloué, Karine Durand, Thomas Naves
This paper proposes using UHF-dielectrophoresis crossover frequency (EMS) to predict tumor mutational burden (TMB) as a rapid, low-cost alternative to whole exome sequencing.
bioRxiv · Nov 5, 2024 · PreprintCancer Biology