Author

A. Naba

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cell Biology· 2 Biochemistry· 1 Cancer Biology· 1 Physiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 5 Assay:proteomics· 5 Approach:statistical model· 4 Organism:human· 3 Approach:deep learning· 2 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Organism:Drosophila· 1

Frequent Co-Authors

F. Lee· 2 shared M. N. Davis· 2 shared A. Barque· 1 shared A. K. Bedran-Russo· 1 shared A. Khan· 1 shared C. Gomez· 1 shared C. Renner· 1 shared I. N. Taha· 1 shared

Activity by Year

2019-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 14 mutual co-author links

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2 shared papersCell Biology

F. Lee

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Author profile →

5 papers

Recent·Most cited

Time-lapsed proteomics reveals a role for the novel protein, SNED1, in modulating ECM composition and protein folding

F. Lee, X. Shao, Y. Gao, A. Naba

This paper introduces a time-lapsed proteomic method to study ECM dynamics and identifies SNED1's role in modulating ECM composition and protein folding.

bioRxiv · Jan 13, 2022 · PreprintCell Biology

Multi-modal profiling of the extracellular matrix of human fallopian tubes and serous tubal Intraepithelial carcinomas

C. Renner, C. Gomez, M. R. Visetsouk, I. N. Taha, A. Khan, S. McGregor, P. Weisman, A. Naba, K. S. Masters, P. K. Kreeger

The paper characterizes the extracellular matrix (ECM) composition in benign fallopian tubes and serous intraepithelial carcinomas (STICs), identifying ECM protein changes associated with STIC formation.

bioRxiv · Sep 21, 2021Cancer Biology

Computational and experimental characterization of the novel ECM glycoprotein SNED1 and prediction of its interactome

S. D. Vallet, M. N. Davis, A. Barque, S. Ricard-Blum, A. Naba

This study characterizes the ECM protein SNED1 through computational and experimental methods, identifying its potential interactors and functional roles in cell signaling and ECM organization.

bioRxiv · Jul 27, 2020Biochemistry

Proteomic pipeline to identify age-related compositional and structural changes of the human dentin extracellular matrix

M. C. Reis, F. Lee, A. K. Bedran-Russo, A. Naba

The paper develops a proteomic pipeline to analyze age-related changes in the human root dentin extracellular matrix, identifying compositional and structural differences between young and old individuals.

bioRxiv · May 27, 2020 · PreprintPhysiology

In-silico definition of the Drosophila melanogaster matrisome

M. N. Davis, S. Horne-Badovinac, A. Naba

The paper defines the Drosophila melanogaster matrisome using computational pipelines, identifying 641 genes and classifying them into structural and functional categories.

bioRxiv · Aug 2, 2019Cell Biology