Author

B. Vogeli

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2 Biochemistry· 1 Cell Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Organism:human· 3 Approach:biophysical modeling· 1 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:deep learning· 1 Research Focus:protein folding & dynamics· 1

Frequent Co-Authors

M. A. Henen· 2 shared A. Dhiman· 1 shared A.-C. Tan· 1 shared C. A. Musselman· 1 shared C. M. Clements· 1 shared C. N. Chi· 1 shared D. A. Norris· 1 shared D. Ashkinadze· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 15 mutual co-author links

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2 shared papersCell Biology

M. A. Henen

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

SASH1 interacts with TNKS2 and promotes human melanocyte stem cell maintenance

K. A. Lambert, C. M. Clements, N. Mukherjee, T. R. Pacheco, S. X. Shellman, M. A. Henen, B. Vogeli, N. B. Goldstein, S. Birlea, J. Hintzsche, A.-C. Tan, R. Zhao, D. A. Norris, W. A. Robinson, Y. Wang, , Y. G. Shellman

This study identifies SASH1 as a regulator of melanocyte stem cell maintenance, showing that the S519N variant disrupts its function and links to pigmentation disorders.

bioRxiv · Sep 26, 2023 · PreprintCell Biology

PBRM1 BD2 and BD4 associate with RNA to facilitate chromatin association

S. M. De Silva, S. Sood, A. Dhiman, K. F. Mercedes, M. A. Henen, B. Vogeli, E. Dykhuizen, C. A. Musselman

This study shows that PBRM1's BD2 and BD4 bromodomains bind RNA, which is necessary for PBRM1's chromatin association and cellular growth effects.

bioRxiv · Feb 7, 2022 · PreprintBiochemistry

Atomic resolution Protein Allostery from the multi-state Structure of a PDZ Domain

D. Ashkinadze, H. Kadavath, C. N. Chi, M. Friedmann, D. Strotz, P. Kumari, M. Minges, R. Cadalbert, S. KÖnigl, P. Güntert, B. Vogeli, R. Riek

The paper determines multi-state structures of the PDZ2 domain using NMR to study protein allostery and conformational changes.

bioRxiv · Nov 23, 2021Biophysics

Integrating NMR and Simulations Reveals Motions in the UUCG Tetraloop

S. Bottaro, P. J. Nichols, B. Vogeli, M. Parrinello, K. Lindorff-Larsen

The paper integrates NMR and simulations to study UUCG RNA stem-loop dynamics, identifying two states and showing MD simulations overestimate a non-native conformation.

bioRxiv · Jan 4, 2020Biophysics