Author

E. L. Braun

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 5 Zoology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 5 Research Focus:phylogenetics / evolution· 4 Assay:DNA methylation· 3 Organism:zebrafish· 2 Approach:deep learning· 1 Approach:experimental assay· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

R. T. Kimball· 4 shared B. C. Faircloth· 2 shared M. Zhao· 2 shared P. A. Hosner· 2 shared R. T. Brumfield· 2 shared S. A. Smith· 2 shared A. Dornburg· 1 shared A. Pandey· 1 shared

Activity by Year

2020-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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4 shared papersEvolutionary Biology

R. T. Kimball

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Author profile →

6 papers

Recent·Most cited

Testing the mettle of METAL: A comparison of phylogenomic methods using a challenging but well-resolved phylogeny

E. L. Braun, C. H. Oliveros, N. D. White Carreiro, M. Zhao, T. C. Glenn, R. T. Brumfield, M. J. Braun, R. T. Kimball, B. C. Faircloth

The paper compares phylogenomic methods using a well-resolved bird species tree, finding that ML concatenation performs best, while METAL shows promise with large datasets.

bioRxiv · Feb 28, 2024 · PreprintEvolutionary Biology

Molecular early burst associated with the diversification of birds at the K-Pg boundary

J. S. Berv, S. Singhal, D. J. Field, N. Walker-Hale, S. W. McHugh, J. R. Shipley, E. T. Miller, R. T. Kimball, E. L. Braun, A. Dornburg, C. T. Parins-Fukuchi, R. O. Prum, B. M. Winger, M. Friedman, S. A. Smith

The paper identifies a molecular early burst in avian evolution around the K-Pg boundary, linked to shifts in substitution rates and allometric scaling relationships.

bioRxiv · Oct 21, 2022Evolutionary Biology

Reconciling GenBank names with standardized avian taxonomies to improve linkage between phylogeny and phenotype

P. A. Hosner, M. Zhao, R. T. Kimball, E. L. Braun, G. Burleigh

This paper reconciles avian species names in GenBank with standardized eBird/Clements taxonomy to improve linkage between phylogeny and phenotype data.

bioRxiv · Feb 7, 2022 · PreprintZoology

Historical specimens and the limits of subspecies phylogenomics in the New World quails (Odontophoridae)

J. F. Salter, P. A. Hosner, W. L. Tsai, J. E. McCormack, E. L. Braun, R. T. Kimball, R. T. Brumfield, B. C. Faircloth

This study evaluates the effectiveness of historical specimens in resolving subspecies-level phylogenetic relationships in New World quails using ultraconserved elements, finding that while species-level relationships are well-supported, subspecies-level discordance can be mitigated by analyzing subclades.

bioRxiv · Nov 18, 2021Evolutionary Biology

Categorical edge-based analyses of phylogenomic data reveal conflicting signals for difficult relationships in the avian tree

N. Wang, E. L. Braun, B. Liang, J. Cracraft, S. A. Smith

This study uses edge-based analysis to examine phylogenomic conflicts in avian evolution, revealing gene-specific biases and data type effects that impact resolution of contentious nodes.

bioRxiv · May 17, 2021Evolutionary Biology

Protein evolution is structure dependent and non-homogeneous across the tree of life

A. Pandey, E. L. Braun

The paper estimates and compares clade-specific protein evolution models to show non-homogeneous evolution across the tree of life, with structure and population dynamics playing key roles.

bioRxiv · Jan 28, 2020 · PreprintEvolutionary Biology