Author

F. Bemm

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 4 Plant Biology· 3

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 4 Approach:experimental assay· 4 Assay:whole-genome sequencing· 4 Organism:Arabidopsis· 3 Research Focus:development & morphogenesis· 3 Approach:statistical model· 3 Research Focus:chromatin & epigenetic regulation· 2 Research Focus:gene regulatory network inference· 2

Frequent Co-Authors

D. Weigel· 6 shared A.-L. Van de Weyer· 2 shared R. Schwab· 2 shared A. C. Barragan· 1 shared B. A. Fraser· 1 shared B. McDonald· 1 shared B. Nueffer· 1 shared B. Waithaka· 1 shared

Activity by Year

2018-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 11 mutual co-author links

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6 shared papersPlant Biology

D. Weigel

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Author profile →

7 papers

Recent·Most cited

Genome-wide association studies reveal a rapidly evolving candidate avirulence effector in the Cercospora leaf spot pathogen Cercospora beticola

C. CHEN, H. Keunecke, F. Bemm, G. Gyetvai, E. Neu, F. J. Kopisch-Obuch, B. McDonald, J. Stapley

This study identifies a rapidly evolving avirulence effector gene, AvrCR4, in Cercospora beticola using GWAS, showing its association with virulence to the resistance gene BvCR4.

bioRxiv · Jun 11, 2023 · PreprintEvolutionary Biology

Homozygosity at its Limit: Inbreeding Depression in Wild Arabidopsis arenosa Populations

A. C. Barragan, M. Collenberg, R. Schwab, M. Kerstens, I. Bezrukov, F. Bemm, D. Pozarova, F. Kolar, D. Weigel

The paper investigates inbreeding depression in wild Arabidopsis arenosa populations by analyzing hybrid plants and finds that increased homozygosity, rather than outbreeding depression, is associated with deleterious phenotypes.

bioRxiv · Jan 24, 2021 · PreprintPlant Biology

Improved reference genome uncovers novel sex-linked regions in the guppy (Poecilia reticulata)

B. A. Fraser, J. R. Whiting, J. R. Paris, C. J. Weadick, P. J. Parsons, D. Charlesworth, R. Bergero, F. Bemm, M. Hoffmann, V. A. Kottler, C. Liu, C. Dreyer, D. Weigel

The paper presents an improved guppy reference genome using long-read sequencing, revealing novel sex-linked regions and resolving previous contradictions in Y chromosome studies.

bioRxiv · Aug 7, 2020Evolutionary Biology

Multiple modes of convergent adaptation in the spread of glyphosate-resistant Amaranthus tuberculatus

J. M. Kreiner, D. Giacomini, F. Bemm, B. Waithaka, J. Regalado, C. Lanz, J. Hildebrandt, P. H. Sikkema, P. J. Tranel, D. Weigel, J. R. Stinchcombe, S. I. Wright

This study investigates the genetic mechanisms of glyphosate resistance in Amaranthus tuberculatus, finding multiple modes of convergent adaptation through gene flow and de novo mutations in different populations.

bioRxiv · Jul 15, 2019Evolutionary Biology

The Arabidopsis thaliana pan-NLRome

A.-L. Van de Weyer, F. Monteiro, O. J. Furzer, M. T. Nishimura, V. Cevik, K. Witek, J. D. G. Jones, J. L. Dangl, D. Weigel, F. Bemm

The paper defines the Arabidopsis thaliana pan-NLRome by analyzing NLR diversity across 65 accessions, finding that 40 accessions saturate the NLRome and identifying architectural diversity and selective forces.

bioRxiv · Jan 31, 2019Plant Biology

Long-term balancing selection drives evolution of immunity genes in Capsella

D. Koenig, J. Hagmann, R. Li, F. Bemm, T. Slotte, B. Nueffer, S. Wright, D. Weigel

The paper shows that balancing selection maintains genetic diversity at immunity genes across Capsella species after population bottlenecks.

bioRxiv · Nov 26, 2018Evolutionary Biology

Modulation of ACD6 dependent hyperimmunity by natural alleles of an Arabidopsis thaliana NLR resistance gene

W. Zhu, M. Zaidem, A.-L. Van de Weyer, R. M. Gutaker, E. Chae, S.-T. Kim, F. Bemm, L. Li, R. Schwab, F. Unger, M. J. Beha, M. Demar, D. Weigel

The paper investigates how natural alleles of the NLR gene SNC1 modulate the autoimmune activity of the ACD6 gene in Arabidopsis thaliana, revealing genetic interactions that influence immune system trade-offs.

bioRxiv · Apr 13, 2018Plant Biology