Author

J. Andrade

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cell Biology· 2 Ecology· 1 Immunology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Research Focus:cell type annotation· 2 Organism:human· 2 Assay:proteomics· 2 Organism:bacteria (other)· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1

Frequent Co-Authors

B. Ueberheide· 3 shared D. Fenyo· 2 shared M. Askenazi· 2 shared A. A. Wang· 1 shared A. Dornburg· 1 shared A. Thomas· 1 shared A. Wudzinska· 1 shared B. Miwatani-Minter· 1 shared

Activity by Year

2017-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 26 mutual co-author links

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3 shared papersCell Biology

B. Ueberheide

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Author profile →

5 papers

Recent·Most cited

D-type cyclins regulate DNA mismatch repair in the G1 and S phases of the cell cycle, maintaining genome stability

G. Rona, B. Miwatani-Minter, Q. Zhang, H. V. Goldberg, M. A. Kerzhnerman, J. B. Howard, D. Simoneschi, E. Lane, J. W. Hobbs, E. Sassani, A. A. Wang, S. Keegan, D. J. Laverty, C. G. Piett, L. S. Pongor, , M. Pagano

This study shows D-type cyclins inhibit mismatch repair (MMR) in G1 phase by shielding p21, while their degradation in S phase enables proper MMR function, maintaining genome stability.

bioRxiv · Jan 12, 2024Cell Biology

Cell wall proteomics in live Mycobacterium tuberculosis uncovers exposure of ESX substrates to the periplasm

N. Jaisinghani, M. L. Previti, J. Andrade, M. Askenazi, B. Ueberheide, J. C. Seeliger

This study identifies cell wall proteins in Mycobacterium tuberculosis using APEX2 tagging, revealing ESX substrate exposure to the periplasm.

bioRxiv · Mar 29, 2023 · PreprintMicrobiology

Anchoring the mean generation time in the SEIR to mitigate biases in R0 estimates due to uncertainty in the distribution of the epidemiological delays

J. Andrade, J. Duggan

This paper introduces a modified SEIR model to improve R0 estimates by anchoring the mean generation time, reducing biases caused by uncertainty in epidemiological delays.

bioRxiv · Jan 13, 2023 · PreprintEcology

A highly diverse set of novel immunoglobulin-like transcript (NILT) genes in zebrafish indicates a wide range of functions with complex relationships to mammalian receptors

D. J. Wcisel, A. Dornburg, S. C. McConnell, K. M. Hernandez, J. Andrade, J. L. O. de Jong, G. W. Litman, J. A. Yoder

The paper identifies a highly diverse set of NILT genes in zebrafish, revealing complex relationships to mammalian receptors and suggesting multiple roles in host immunity.

bioRxiv · Apr 21, 2022Immunology

LINE-1 and the cell cycle: protein localization and functional dynamics

P. Mita, A. Wudzinska, X. Sun, J. Andrade, S. Nayak, D. Kahler, S. Badri, J. LaCava, B. Ueberheide, C. Yun, D. Fenyo, J. Boeke

This study identifies L1 protein nuclear entry mechanisms and shows a cell cycle bias for L1 retrotransposition peaking in S phase.

bioRxiv · Jun 30, 2017Cell Biology