Author

J. C. Ignacio-Espinoza

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2

Signature Assays, Organisms & Methods

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Assay:metagenomics· 2 Research Focus:benchmarking· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Organism:multiple species· 1 Approach:statistical model· 1

Frequent Co-Authors

S. Hou· 2 shared A. Long· 1 shared A. M. Long· 1 shared J. A. Fuhrman· 1 shared J. Fuhrman· 1 shared J. Weissman· 1 shared S. Laperriere· 1 shared Y.-C. Yeh· 1 shared

Activity by Year

2019-2020 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 18 mutual co-author links

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2 shared papersMicrobiology

S. Hou

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2 papers

Recent·Most cited

MicrobiologybioRxivPreprintOct 30, 2020

Ribosome-linked mRNA-rRNA chimeras reveal active novel virus-host associations.

J. C. Ignacio-Espinoza, S. Laperriere, Y.-C. Yeh…·J. A. Fuhrman

The paper links marine viral gene expression to specific hosts using mRNA-rRNA chimeras, identifying novel virus-host associations and validating the method's accuracy.

DOI 10.1101/2020.10.30.332502

metagenomicsexperimental assay

𝕏 PostBluesky

MicrobiologybioRxivSep 30, 2019

Benchmarking metagenomic marine microbial growth prediction from codon usage bias and peak-to-trough ratios

A. M. Long, S. Hou, J. C. Ignacio-Espinoza, J. Fuhrman

This study benchmarks methods for predicting marine microbial growth rates using codon usage bias and peak-to-trough ratios from metagenomic data.

DOI 10.1038/s41396-020-00773-1

multiple speciesmetagenomics

𝕏 PostBluesky