Author

J. Farrell

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 2 Cancer Biology· 2 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 4 Approach:experimental assay· 4 Organism:human· 3 Assay:imaging· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Organism:chicken / avian· 1 Research Focus:differential expression· 1

Frequent Co-Authors

A. Carrier· 1 shared A. Krstic· 1 shared A. L. Bayer· 1 shared A.-L. Ferchaud· 1 shared B. Burkhalter· 1 shared B. Wandell· 1 shared C. B. Eastman· 1 shared C. Schnitzler· 1 shared

Activity by Year

2018-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 13 mutual co-author links

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1 shared paperEvolutionary Biology

A. Carrier

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Novel Imaging Guidance for Cholesteatoma Surgery usingTissue Autofluorescence

S. Yang, J. Farrell, S. Ye, I. Ahmad, T. A. Valdez

The paper develops a fluorescence imaging system to distinguish cholesteatoma tissue from middle ear mucosa using autofluorescence properties during surgery.

bioRxiv · Jun 12, 2023 · PreprintBioengineering

AKT1 is Required for a Complete Palbociclib-induced Senescence Phenotype in BRAF-V600E-Driven Human Melanoma

A. L. Bayer, J. Pietruska, J. Farrell, S. McRee, P. Alcaide, P. W. Hinds

This study shows AKT1 is required for Palbociclib-induced senescence in BRAF-V600E melanoma cells, acting through NF-kB but not cGAS-STING.

bioRxiv · Dec 2, 2021Cancer Biology

Simulations of fluorescence imaging in the oral cavity

Z. Lyu, H. Jiang, F. Xiao, J. Rong, T. Zhang, B. Wandell, J. Farrell

The paper simulates fluorescence imaging in the oral cavity using a 3D model and compares simulated data with real camera data to quantify porphyrin fluorescence relative to other fluorophores.

bioRxiv · Mar 31, 2021Bioengineering

Mutational, transcriptional and viral shedding dynamics of the marine turtle fibropapillomatosis tumor epizootic

K. Yetsko, J. Farrell, M. R. Stammnitz, L. Whitmore, J. Whilde, C. B. Eastman, D. Rollinson Ramia, R. Thomas, A. Krstic, P. Linser, S. Creer, G. Carvalho, B. Burkhalter, E. P. Murchison, C. Schnitzler, D. J. Duffy

This study investigates the mutational, transcriptional, and viral shedding dynamics of fibropapillomatosis in marine turtles, revealing molecular differences between tumor types and identifying potential therapeutic targets.

bioRxiv · Feb 4, 2020 · PreprintCancer Biology

Combining population genomics and forward simulations to investigate stocking impacts: A case study of Muskellunge (Esox masquinongy) from the St. Lawrence River basin

Q. Rougemont, A. Carrier, J. Leluyer, A.-L. Ferchaud, J. Farrell, D. Hatin, P. Brodeur, L. Bernatchez

This study uses genomic data and simulations to assess the genetic impacts of fish stocking on Muskellunge populations in the St. Lawrence River basin, finding weak effects in large rivers but stronger effects in smaller stocked populations.

bioRxiv · Jul 6, 2018Evolutionary Biology