Author

J. Shaffer

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cell Biology· 1 Microbiology· 1 Physiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:development & morphogenesis· 2 Assay:metabolomics· 2 Assay:bulk RNA-seq· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

A. Andrews· 1 shared A. Carrer· 1 shared A. Connors· 1 shared A. Farria· 1 shared A. Moradian· 1 shared A. Robbat· 1 shared A. Rokas· 1 shared B. B. Yoo· 1 shared

Activity by Year

2019-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 13 mutual co-author links

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1 shared paperCell Biology

A. Andrews

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

The carnitine shuttle links mitochondrial metabolism to histone acetylation and lipogenesis

L. T. Izzo, S. Trefely, C. Demetriadou, J. Drummond, T. Mizukami, N. Kuprasertkul, A. Farria, P. Nguyen, L. Reich, J. Shaffer, H. Affronti, A. Carrer, A. Andrews, B. C. Capell, N. W. Snyder, K. E. Wellen

This study identifies the carnitine shuttle and CrAT as a pathway for mitochondrial-to-cytosolic acetyl-CoA transfer, independent of ACLY, in cancer cells.

bioRxiv · Sep 24, 2022 · PreprintCell Biology

Peripheral Neuronal Activation Shapes the Microbiome and Alters Gut Physiology

J. A. Griffiths, B. B. Yoo, P. Thuy-Boun, V. Cantu, K. Weldon, C. Challis, M. J. Sweredoski, K. Y. Chan, T. M. Thron, G. Sharon, A. Moradian, G. Humphrey, Q. Zhu, J. Shaffer, D. W. Wolan, , S. Mazmanian

This study activates specific gut neurons in mice to show they influence microbiome structure and gut physiology, including bile acids and fecal output, without brain signals.

bioRxiv · Apr 12, 2021Physiology

Rapid phenotypic and metabolomic domestication of wild Penicillium molds on cheese

I. Bodinaku, J. Shaffer, A. Connors, J. Steenwyk, E. Kastman, A. Rokas, A. Robbat, B. Wolfe

This study shows that wild Penicillium molds rapidly evolve phenotypic and metabolomic traits similar to industrial cheese cultures when repeatedly passaged on cheese.

bioRxiv · May 23, 2019Microbiology