Author

Jianhua Zhang

The University of Texas MD Anderson Cancer Center

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

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Bioinformatics· 2 Cancer Biology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Organism:human· 2 Approach:statistical model· 2 Organism:Arabidopsis· 1 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:metabolism & bioenergetics· 1

Frequent Co-Authors

Xingzhi SongiD· 2 shared Andrew Futreal· 1 shared Celia Sze Ling Mak· 1 shared Christopher J. LogothetisiD· 1 shared Chunyun Guan· 1 shared Daniel S. T. Hughes· 1 shared David A. WheeleriD· 1 shared Guocan WangiD· 1 shared

Activity by Year

2015-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 13 mutual co-author links

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2 shared papersCancer Biology

Xingzhi SongORCID

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Author profile →

4 papers

Recent·Most cited

Cancer BiologyProceedings of the National Academy of SciencesPeer-reviewedAug 5, 2024

Prostate cancer-induced endothelial-to-osteoblast transition generates an immunosuppressive bone tumor microenvironment

Guoyu Yu, Paul Gettys Corn, Celia Sze Ling Mak…·Sue-Hwa Lin

This study identifies a prostate cancer-induced endothelial-to-osteoblast transition that creates an immunosuppressive bone tumor microenvironment, reducing the effectiveness of immune checkpoint therapy in bone metastatic castrate-resistant prostate cancer.

51 citationstop 2%

humanbulk RNA-seq

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Plant BiologybioRxivPreprintDec 30, 2017

NRT1.1-dependent NH4+ toxicity in Arabidopsis is associated with disturbed balance between NH4+ uptake and assimilation

Shaofen Jian, Qiong Liao, Haixing Song…·Zhenhua Zhang

This study shows that NRT1.1 in Arabidopsis increases NH4+ uptake and accumulation, disrupts NH4+ metabolism, and exacerbates NH4+ toxicity under sole NH4+ conditions.

DOI 10.1101/241174

Arabidopsisproteomics

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BioinformaticsGenome BiologyPeer-reviewedAug 24, 2016

Accounting for tumor heterogeneity using a sample-specific error model improves sensitivity and specificity in mutation calling for sequencing data

Yu Fan, Liu Xi, Daniel S. T. Hughes…·Wenyi Wang

DOI 10.1186/s13059-016-1029-6

humanwhole-exome sequencing

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BioinformaticsbioRxivPreprintOct 22, 2015

Flowr: Robust and efficient pipelines using a simple language-agnostic approach

Sahil Seth, Samir Amin, Xingzhi Song…·Jianhua Zhang

Flowr provides a robust, scalable, and portable framework for designing computing pipelines using a simple language-agnostic approach.

DOI 10.1101/029710

experimental assaysoftware / tool

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