Author

Ling Liu

Center for Life Sciences

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

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Bioinformatics· 1 Cell Biology· 1 Developmental Biology· 1 Genetics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Organism:mouse· 3 Approach:statistical model· 3 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Organism:bacteria (other)· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:contrastive learning· 1

Frequent Co-Authors

Aaron Demers· 1 shared Aaron M. Kershner· 1 shared Ahmad N. Nabhan· 1 shared Albin Huang· 1 shared Andrew P. May· 1 shared Angela Pisco· 1 shared Ankit S. Baghel· 1 shared Annie Lo· 1 shared

Activity by Year

2018-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperCell Biology

Aaron Demers

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Author profile →

5 papers

Recent·Most cited

Mapping disease traits onto spatiotemporal domain landscapes through scalable multi-sample integration of spatial transcriptomics

Songming Zhang, Shifu Luo, Yuxiao Luo, Shuquan Su, Ling Liu, Ying Shi, Wu-Jun Li, Tian Tian, Jinyan Li

STUltra integrates spatial transcriptomics data to map disease traits onto spatiotemporal tissue landscapes, outperforming existing methods in scalability and speed.

bioRxiv · Aug 10, 2026 · PreprintBioinformatics

Reprogramming an RNA-guided archaeal TnpB endonuclease for genome editing

Ying Cao Xu, Tao Liu, Jing Wang, Binyang Xiong, Ling Liu, Nan Peng

This study reprograms an archaeal TnpB endonuclease for genome editing, showing it can efficiently edit bacterial cells.

Cell Discovery · Nov 11, 2023Peer-reviewedMolecular Biology

NR5A2 connects genome activation to the first lineage segregation in early mouse development

Fang-Nong Lai, Lijia Li, Xiaoyu Hu, Bofeng Liu, Ziqi Zhu, Ling Liu, Qiang Fan, Huabin Tian, Kai Xu, Xukun Lu, Qing Li, Feng Kong, Lijuan Wang, Zili Lin, Hongyu Deng, , Wei Xie

This study identifies NR5A2 as a key regulator linking zygotic genome activation to the first lineage segregation in early mouse development.

bioRxiv · Nov 25, 2022 · PreprintDevelopmental Biology

First report and multilocus genotyping of Enterocytozoon bieneusi from Tibetan pigs in southwestern China

Run Luo, Leiqiong Xiang, Haifeng Liu, Zhijun Zhong, Li Liu, Lei Deng, Yuan Song, Ling Liu, Xiangming Huang, Ziyao Zhou, Hualin Fu, Yan Luo, Guangneng Peng

This study reports the prevalence and genetic diversity of E. bieneusi in Tibetan pigs, identifying novel genotypes and zoonotic potential.

Parasite · Jan 1, 2019Peer-reviewedGenetics

Single-cell transcriptomic characterization of 20 organs and tissues from individual mice creates a Tabula Muris

Nicholas Schaum, Jim Karkanias, Norma F Neff, Andrew P. May, Stephen R. Quake, Tony Wyss-Coray, Spyros Darmanis, Joshua Batson, Olga Botvinnik, Michelle B. Chen, Steven Chen, Foad Green, Robert Jones, Ashley Maynard, Lolita Penland, , Tony Wyss-Coray

The paper creates a single-cell transcriptomic atlas of 20 mouse organs and tissues, providing a resource for studying gene expression across cell types.

bioRxiv · Mar 29, 2018 · PreprintCell Biology