Author

M. A. S. Fonseca

Primary ORCID profile (0000-0003-2235-9156 · 1 paper)Unclaimed ORCID profile · follow to get notified of new preprints

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Same name, identified by ORCID

M. A. S. FonsecaiD1 paper · Universidade de São Paulo

Biology Disciplines

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Cancer Biology· 2

Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

J.-H. Seo· 2 shared K. Lawrenson· 2 shared M. L. Freedman· 2 shared P. Cejas· 2 shared R. I. Corona· 2 shared A. Font-Tello· 1 shared A. Gusev· 1 shared A. Kaipainen· 1 shared

Activity by Year

2019-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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2 shared papersCancer Biology

J.-H. Seo

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2 papers

Recent·Most cited

Cancer BiologybioRxivOct 23, 2020

Reprogramming of the FOXA1 cistrome in treatment-emergent neuroendocrine prostate cancer

S. C. Baca, D. Y. Takeda, J.-H. Seo…·M. L. Freedman

The paper identifies FOXA1 reprogramming in NEPC and shows its role in maintaining NE lineage features through epigenomic profiling.

DOI 10.1038/s41467-021-22139-7

𝕏 PostBluesky

Cancer BiologybioRxivNov 12, 2019

Predicting master transcription factors from pan-cancer expression data

J. Reddy, M. A. S. Fonseca, R. I. Corona…·K. Lawrenson

This paper introduces CaCTS, an algorithm that identifies candidate master transcription factors (MTFs) across 34 cancer types using RNA-seq data, revealing novel MTFs and functional groupings.

DOI 10.1126/sciadv.abf6123

humanbulk RNA-seq

𝕏 PostBluesky