Author

M. J. Allen

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3

Signature Assays, Organisms & Methods

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Assay:metagenomics· 3 Research Focus:cell type annotation· 2 Approach:statistical model· 2 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:ecology & biodiversity· 1 Approach:experimental assay· 1

Frequent Co-Authors

B. Temperton· 3 shared H. H. Buchholz· 3 shared M. L. Michelsen· 3 shared L. M. Bolanos· 2 shared A. A. Zayed· 1 shared A. Bell· 1 shared A. Farbos· 1 shared A. G. Bell· 1 shared

Activity by Year

2020-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 32 mutual co-author links

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3 shared papersMicrobiology

B. Temperton

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3 papers

Recent·Most cited

MicrobiologybioRxivSep 19, 2022

Long-read powered viral metagenomics in the oligotrophic Sargasso Sea

J. L. Warwick-Dugdale, F. Tian, M. L. Michelsen…·B. Temperton

This study uses long-read sequencing to analyze viral communities in the Sargasso Sea, identifying new phage populations and highlighting the importance of long reads for viral genome diversity and function.

DOI 10.1038/s41467-024-48300-6

metagenomicsdeep learning

𝕏 PostBluesky

MicrobiologybioRxivPreprintAug 10, 2022

Pelagibacter phage Skadi - An abundant polar specialist that exemplifies ecotypic niche specificity among the most abundant viruses on Earth

H. H. Buchholz, L. M. Bolanos, A. G. Bell…·B. Temperton

The paper identifies and characterizes Skadi, a pelagiphage that specializes in cold-water environments, showing ecotypic niche specificity and contrasting with the globally dominant HTVC010P.

DOI 10.1101/2022.08.10.503363

metagenomicsstatistical model

𝕏 PostBluesky

MicrobiologybioRxivApr 27, 2020

Efficient Dilution-to-Extinction isolation of novel virus-host model systems for fastidious heterotrophic bacteria

H. H. Buchholz, M. L. Michelsen, L. M. Bolanos…·B. Temperton

The paper introduces a method to isolate virus-host systems for fastidious heterotrophic bacteria, identifying new phages and viruses with ecotype-specific host ranges and infection dynamics.

DOI 10.1038/s41396-020-00872-z

metagenomicsexperimental assay

𝕏 PostBluesky