Author

P. Lopez

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Evolutionary Biology· 2 Scientific Communication & Education· 2 Microbiology· 1 Pathology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 3 Approach:deep learning· 2 Research Focus:host-pathogen & immune response· 2 Organism:human· 2 Assay:metagenomics· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

D. Sussfeld· 2 shared E. Bapteste· 2 shared E. Pelletier· 2 shared A. Fender· 1 shared A. J. Rodriguez· 1 shared A. L. Bidwell· 1 shared A. Marie· 1 shared A. Uppala· 1 shared

Activity by Year

2021-2024 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 8 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersEvolutionary Biology

D. Sussfeld

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

New groups of highly divergent proteins in families as old as cellular life with important biological functions in the ocean

D. Sussfeld, R. Lannes, E. Corel, G. Bernard, P. Martin, E. Bapteste, E. Pelletier, P. Lopez

The paper identifies new divergent protein groups in ancient gene families from marine metagenomes, highlighting environmental diversity and potential biological novelty.

bioRxiv · Jan 8, 2024Evolutionary Biology

Bursts of novel composite gene families at major nodes in animal evolution

P. O. Mulhair, R. J. Moran, J. s. Pathmanathan, D. Sussfeld, C. J. Creevey, K. Siu-Ting, F. J. Whelan, D. Pisani, B. Constantinides, E. Pelletier, p. lopez, E. Bapteste, J. O. McInerney, M. J. O'Connell

The paper identifies composite gene families in animals, showing they emerge abruptly at major evolutionary nodes and are independently evolved in multiple clades.

bioRxiv · Jul 10, 2023 · PreprintEvolutionary Biology

Heavy metals in moss guide environmental justice investigation: a case study using community science in Seattle, WA, USA

S. Jovan, C. Zuidema, M. M. Derrien, A. L. Bidwell, W. Brinkley, R. J. Smith, D. Blahna, R. Barnhill, L. Gould, A. J. Rodriguez, M. C. Amacher, T. D. Abel, P. Lopez

This paper uses moss sampling and community science to map heavy metal pollution in Seattle, identifying priority metals and advocating for further environmental justice actions.

bioRxiv · Apr 20, 2022Scientific Communication & Education

First isolation of virulent Tenacibaculum maritimum strains from diseased orbicular batfish (Platax orbicularis) farmed in Tahiti Island

P. Lopez, D. Saulnier, S. Swarup-Gaucher, R. David, C. Lau, R. Taputuarai, C. Belliard, C. Basset, V. Labrune, A. Marie, J. F. Bernardet, E. Duchaud

The study isolates virulent Tenacibaculum maritimum strains from diseased orbicular batfish in Tahiti, linking them to white-patch disease and identifying genetic diversity among isolates.

bioRxiv · Mar 15, 2021 · PreprintPathology

scite: a smart citation index that displays the context of citations and classifies their intent using deep learning

J. M. Nicholson, M. Mordaunt, P. Lopez, A. Uppala, D. Rosati, N. P. Rodrigues, P. Grabitz, S. Rife

scite classifies citation intent and provides contextual information from full-text articles to improve research evaluation.

bioRxiv · Mar 15, 2021Scientific Communication & Education

Proteomics-based determination of double stranded RNA interactome reveals known and new factors involved in Sindbis virus infection

E. Girardi, M. Messmer, P. Lopez, A. Fender, J. Chicher, B. Chane-Woon-Ming, P. Hammann, S. Pfeffer

This study identifies SFPQ as a new proviral factor involved in Sindbis virus infection by characterizing the dsRNA interactome using anti-dsRNA immunoprecipitation and mass spectrometry.

bioRxiv · Mar 9, 2021Microbiology