Author

P. M. Gasper

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Biochemistry· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Organism:E. coli· 1 Research Focus:gene regulatory network inference· 1 Approach:statistical model· 1 Research Focus:trajectory inference· 1

Frequent Co-Authors

A. A. Chen· 1 shared A. M. Yu· 1 shared E. J. Strobel· 1 shared J. B. Lucks· 1 shared K. E. Watters· 1 shared

Activity by Year

2018-2018 · peak 1/yr

Co-Author Collaboration Network

5 top collaborators · 10 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBiochemistry

A. A. Chen

Mutual co-authors in cluster

Author profile →

1 paper

Recent·Most cited

BiochemistrybioRxivJul 28, 2018

Computationally Reconstructing Cotranscriptional RNA Folding Pathways from Experimental Data Reveals Rearrangement of Non-Native Folding Intermediates

A. M. Yu, P. M. Gasper, E. J. Strobel…·J. B. Lucks

This paper introduces R2D2, a method to predict RNA folding pathways from cotranscriptional SHAPE-Seq data, revealing non-native intermediates in E. coli SRP RNA folding.

DOI 10.1016/j.molcel.2020.12.017

E. colibulk RNA-seq

𝕏 PostBluesky