Author

S. Laubinger

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Plant Biology· 5

Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 4 Approach:experimental assay· 3 Assay:bulk RNA-seq· 2 Approach:statistical model· 2 Research Focus:transcription & RNA processing· 2 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:deep learning· 1

Frequent Co-Authors

A. b. Hur· 1 shared A. Barta· 1 shared A. F. Mangilet· 1 shared A. Henschen· 1 shared A. Jarmolowski· 1 shared A. Matsui· 1 shared A. S. N. Reddy· 1 shared A. Wachter· 1 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

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1 shared paperPlant Biology

A. b. Hur

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5 papers

Recent·Most cited

The Arabidopsis U1 snRNP regulates mRNA 3'-end processing

A. F. Mangilet, J. Weber, S. Schueler, I. Droste-Borel, S. Streicher, T. Schmutzer, G. Rot, B. Macek, S. Laubinger

This study identifies U1 snRNP-associated proteins in Arabidopsis and shows their role in regulating mRNA 3'-end processing through premature cleavage and alternative polyadenylation site selection.

bioRxiv · Sep 19, 2023Plant Biology

A high resolution single molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis

R. Zhang, R. Kuo, M. Coulter, C. P. G. Calixto, J. C. Entizne, W. Guo, Y. Marquez, L. Milne, S. Riegler, A. Matsui, M. Tanaka, S. Harvey, G. Yubang, T. Wiebner-Kroh, M. Crespi, , J. W. Brown

This paper introduces a new Arabidopsis transcriptome dataset with improved accuracy and resolution using novel Iso-seq analysis methods, enhancing transcript expression and splicing analysis.

bioRxiv · Sep 2, 2021 · PreprintPlant Biology

Transcriptome sequence reveals candidate genes involving in the post-harvest hardening of trifoliate yam Dioscorea dumetorum

C. Siadjeu, E. Mayland-Quellhorst, S. Laubinger, D. C. Albach

The paper identifies candidate genes associated with post-harvest hardening in D. dumetorum tubers through transcriptome analysis and functional gene expression profiling.

bioRxiv · Feb 16, 2021Plant Biology

Independent parental contributions initiate zygote polarization in Arabidopsis thaliana

K. Wang, H. Chen, Y. Miao, Y. Ma, A. Henschen, J. U. Lohmann, S. Laubinger, M. Bayer

The paper identifies two independent parental contributions to zygote polarization in Arabidopsis thaliana, involving maternal ERECTA and paternal SHORT SUSPENSOR (SSP) in activating the YDA MAP kinase pathway.

bioRxiv · Dec 2, 2020Plant Biology

Metabolic labeling of RNAs uncovers hidden features and dynamics of the Arabidopsis thaliana transcriptome

E. X. Szabo, P. Reichert, M.-K. Lehniger, M. Ohmer, M. de Francisco Amorim, U. Gowik, C. Schmitz-Linneweber, S. Laubinger

This study uses 5-EU metabolic labeling in Arabidopsis to analyze nascent and unstable RNAs, revealing shorter RNA half-lives than previously reported with chemical inhibitors.

bioRxiv · Mar 26, 2019Plant Biology