Author

S. S. Schmokel

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:clustering· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Approach:experimental assay· 1

Frequent Co-Authors

J. B. Jensen· 2 shared L. Dyrskjot· 2 shared M. Knudsen· 2 shared P. Lamy· 2 shared S. V. Lindskrog· 2 shared F. Prip· 1 shared I. K. Nordentoft· 1 shared I. Nordentoft· 1 shared

Activity by Year

2022-2022 · peak 2/yr

Co-Author Collaboration Network

9 top collaborators · 33 mutual co-author links

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2 shared papersCancer Biology

J. B. Jensen

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2 papers

Recent·Most cited

Cancer BiologybioRxivOct 27, 2022

Single nucleus and spatially resolved intra-tumor subtype heterogeneity in bladder cancer

S. V. Lindskrog, S. S. Schmokel, I. Nordentoft…·L. Dyrskjot

This study investigates intra-tumor subtype heterogeneity in bladder cancer using single nucleus RNA-sequencing and spatial transcriptomics, showing higher class 2a weight in bulk RNA-sequencing correlates with worse outcomes.

DOI 10.1016/j.euros.2023.03.006

humanscRNA-seq

𝕏 PostBluesky

Cancer BiologybioRxivOct 14, 2022

Improved Protocol for Single-Nucleus RNA-sequencing of Frozen Human Bladder Tumor Biopsies

S. S. Schmokel, I. K. Nordentoft, S. V. Lindskrog…·L. Dyrskjot

This paper develops a protocol for snRNA-seq of frozen human bladder tumor biopsies, showing optimal conditions for nuclei isolation with minimal transcriptomic changes.

DOI 10.1080/19491034.2023.2186686

humansnRNA-seq

𝕏 PostBluesky