Author

Y.-Z. Shi

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Approach:deep learning· 1 Assay:DNA methylation· 1 Research Focus:protein folding & dynamics· 1 Research Focus:protein structure prediction· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Y.-L. Tan· 2 shared B.-G. Zhang· 1 shared C.-J. Feng· 1 shared J. Liu· 1 shared L. Jin· 1 shared Z.-C. Mu· 1 shared Z.-J. Tan· 1 shared

Activity by Year

2018-2022 · peak 1/yr

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7 top collaborators · 12 mutual co-author links

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2 shared papersBiophysics

Y.-L. Tan

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2 papers

Recent·Most cited

BiophysicsPLOS Computational BiologyPeer-reviewedOct 19, 2022

Ab initio predictions for 3D structure and stability of single- and double-stranded DNAs in ion solutions

Z.-C. Mu, Y.-L. Tan, B.-G. Zhang…·Y.-Z. Shi

This paper presents a coarse-grained model to predict 3D structures and stability of single- and double-stranded DNAs in ion solutions from their sequences, achieving accurate results for various DNA types and ion effects.

DOI 10.1371/journal.pcbi.1010501

DNA methylationwhole-genome sequencing

𝕏 PostBluesky

BiophysicsbioRxivJun 5, 2018

Modeling structure, stability and flexibility of double-stranded RNAs in salt solutions

L. Jin, Y.-Z. Shi, C.-J. Feng…·Z.-J. Tan

This study develops a coarse-grained model to predict 3D structure, stability, and flexibility of dsRNAs in salt solutions, showing improved accuracy with electrostatic potential inclusion.

DOI 10.1016/j.bpj.2018.08.030

statistical modelprotein folding & dynamics

𝕏 PostBluesky