Author
National Cancer Center Research InstituteORCID 0000-0001-5232-411XUnclaimed ORCID profile · follow to get notified of new preprints
12 papers
Recent·Most cited
Tsuyoshi Ueno, Shungo Adachi, Tomohiro Yamazaki…·Tetsuro Hirose
The paper identifies how arcRNAs organize functional proteins through molecular concentration and activated enzyme selection in nuclear stress bodies.
Kazuya Ichihara, Taichi Shiraishi, Haruhiko Morita…·Akinobu Matsumoto
This study introduces TISCA2 and IncepTIS to map and predict stress-responsive translation initiation sites, revealing tissue-specific patterns and enabling engineered mRNA 5' leaders.
Shunsuke Sumi, Koki Makino, Masahiro Onoguchi…·Michiaki Hamada
This paper introduces RLMHelix, an alignment-free method to discover conserved RNA structures in the human genome, identifying new candidates that correlate with RNA-binding protein interactions.
Fumio Maeda, Moeka Nobe, Kenichiro Imai…·Tohru Natsume
The paper develops an EASY-HSV system using HSV-1 genome-maintaining HEK293 cells to simplify and increase the yield of HSV amplicon vector production.
Tsuyoshi Ueno, Shungo Adachi, Ichiro Taniguchi…·Tetsuro Hirose
The paper identifies phosphorylation events and thermosensing mechanisms that regulate CLK1 localization to nuclear stress bodies during thermal stress recovery.
Mina Yoshida, Masahiko Ajiro, Hiroki Ueda…·Akihide Yoshimi
This paper introduces SCALE-CLIP, a method to generate comparable RBP binding maps, and defines a positional and combinatorial regulatory code for alternative splicing.
Kensuke Ninomiya, Shungo Adachi, Toru Suzuki…·Tetsuro Hirose
This study identifies cytoplasmic roles of HSATIII RNAs in forming RNA granules and producing proteins during thermal stress recovery.
Haruko Okabe, Masahiro C. Miura, Asako Sato…·Akio Kanai
This study examines the transcriptomic and proteomic responses of Pyrococcus furiosus to acute heat shock, revealing proteome stability, translation suppression, and a potential role for a histone-like protein in chromatin formation.
Kazuki Kato, Sae Okazaki, Cian Schmitt-Ulms…·Hiroshi Nishimasu
This study characterizes the RNA-guided nuclease-protease complex Cas7-11-Csx29, showing target RNA binding activates Csx29 to cleave Csx30, leading to cell death.
Kensuke Ninomiya, Shungo Adachi, Tohru Natsume…·Tetsuro Hirose
The paper shows that lncRNA-dependent nuclear stress bodies promote intron retention via SR protein phosphorylation during thermal stress recovery.
Kensaku Murano, Yuka W. Iwasaki, Hirotsugu Ishizu…·Haruhiko Siomi
The paper identifies Nxf2 as a key component in the Piwi-piRNA pathway, showing it forms complexes that stabilize Piwi and Panx and initiate co-transcriptional silencing of target transcripts.