Jean‐Luc Guérin

The paper identifies a novel gammacoronavirus causing enteritis in broiler chickens in France, distinct from known poultry coronaviruses.

The paper evaluates duck slurry as a matrix for detecting avian influenza viruses and characterizing their genetics, finding high sensitivity and partial genomic data.

The paper assesses duck vaccination in France and estimates it averted 314-756 outbreaks of highly pathogenic avian influenza, reducing epizootic size by 96-99%.

The paper evaluates nanopore sequencing for rapid AIV profiling, showing its ability to accurately reconstruct viral genomes and detect RNA modifications.

The paper describes an amplicon-based MinION sequencing workflow for rapid genetic typing of avian influenza viruses from field samples, showing links between outbreaks through phylogenetic analysis.

The paper characterizes H5N1 virus infection in a Tibetan black bear using histopathology and sequencing of paraffin-embedded tissues, finding high genetic similarity to a gull strain and evidence of mammalian adaptation.