Author
Heidelberg UniversityORCID 0000-0002-0502-658XUnclaimed ORCID profile · follow to get notified of new preprints
6 papers
Recent·Most cited
Marcio Soares Ferreira, Sebastian Stricker, Tomas W. Fitzgerald…·Ewan Birney
FEHAT automatically detects heart rates in Medaka fish embryos from high-resolution videos, showing reliable performance across temperature perturbations.
Tomas W. Fitzgerald, Ian Brettell, Adrien Léger…·Felix Loosli
The paper introduces the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel, a vertebrate genetic resource for genotype-to-phenotype studies, enabling controlled experiments on complex traits.
Adrien Léger, Ian Brettell, Jack Monahan…·Tomas W. Fitzgerald
The paper analyzes genomic and epigenomic variation in the MIKK panel using long-read sequencing and pan-genome graphs, revealing novel structural variants and methylation patterns.
Omar T. Hammouda, Meng Yue Wu, Verena Kaul…·Joachim Wittbrodt
The paper identifies and validates 16 GWAS candidates with potential predictive power for human cardiovascular diseases using CRISPR/Cas9 in medaka.
Jakob Gierten, Christian Pylatiuk, Omar T. Hammouda…·Felix Loosli
The paper develops an automated high-throughput method for measuring heart rate in medaka and zebrafish embryos without anesthesia or fluorescent reporters.
Omar T. Hammouda, Frank Böttger, Joachim Wittbrodt, Thomas Thumberger
The paper introduces a low-cost DIY method for rapid nucleic acid extraction using cellulose filter discs in pipet tips, enabling fast and reliable genotyping of diverse samples.