Author

Samantha Treagus

UK Health Security AgencyORCID 0000-0002-1905-9024Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cell Biology· 1 Genetic & Genomic Medicine· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:benchmarking· 2 Research Focus:host-pathogen & immune response· 1 Organism:human· 1 Assay:long-read sequencing· 1 Assay:metagenomics· 1 Organism:mouse· 1 Assay:proteomics· 1

Frequent Co-Authors

Steven T. PullaniD· 2 shared Alan McNallyiD· 1 shared Bassam HallisiD· 1 shared Bede ConstantinidesiD· 1 shared Conner Norris· 1 shared David I. WalkeriD· 1 shared David RyderiD· 1 shared Deborah Ferguson· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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Curved chords = mutual co-authorship

2 shared papersGenetic & Genomic Medicine

Steven T. PullanORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Genetic & Genomic MedicinemedRxivPreprintMay 21, 2026

Library preparation strategy critically impacts RNA virus sensitivity in clinical metagenomics

Dominika Stępniak, Bede Constantinides, Mia Weaver…·Joshua Quick

This study shows that library preparation methods significantly affect RNA virus detection in clinical metagenomics, with SISPA-based approaches outperforming others in most scenarios.

1 citation

metagenomicsexperimental assay

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Molecular BiologybioRxivPreprintMar 27, 2024

Long Amplicon Nanopore Sequencing for Dual-Typing RdRp and VP1 Genes of Norovirus Genogroups I and II in Wastewater

G. Scott, David Ryder, M. Buckley…·Frederico M. Batista

This paper develops a long amplicon nanopore sequencing method for dual-typing RdRp and VP1 genes of norovirus in wastewater, revealing diverse genotypes and potential for improved epidemiological tracking.

1 citation

long-read sequencingexperimental assay

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Cell BiologybioRxivPreprintOct 21, 2023

Evaluation of the cross reactivity of neutralising antibody response in vaccinated human and convalescent hamster sera against SARS-CoV-2 variants up to and including JN.1 using an authentic virus neutralisation assay

Naomi S. Coombes, Kevin R. Bewley, Yann Le Duff…·Simon G. P. Funnell

This study evaluates neutralising antibody responses in vaccinated humans and convalescent hamsters against SARS-CoV-2 variants up to JN.1 using an authentic virus neutralisation assay, finding increased resistance to JN.1 in vaccinated individuals and specific neutralisation patterns in hamsters.

9 citations

humanmouse

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