Petri Auvinen

The paper uses whole-genome sequencing to study hybridization and genomic differentiation between grey seal subspecies in a contact zone, finding evidence of recent hybridization and local adaptation.

This study analyzes 200 woodland strawberry genomes to reveal population structure and demographic history across glacial-interglacial cycles, identifying genetic clusters and refugia.

The paper presents a pangenome and pantranscriptome of hexaploid oat, describing gene expression diversity and structural genome variation across 33 accessions and six tissues.

The paper shows Saimaa ringed seals originated 60,000 years ago, long before their lake habitat formed, and have distinct adaptive traits.

This study compares plasmid and phage populations in gut microbiota of Parkinson's disease patients and healthy controls, finding significant differences in diversity and using machine learning to classify subjects with high accuracy.

This study investigates how Propionibacterium freudenreichii adapts to aerobic conditions through transcriptomic and surfaceome analyses, revealing metabolic changes and growth responses.

The paper constructs metagenome-assembled genomes from fecal samples of Parkinson's disease and control groups, identifying microbial diversity and gene differences between the groups.

The paper examines how changes in RNA polymerase concentration affect gene expression in E. coli, finding that mid-term responses correlate with transcription factor network topology.

The paper improves the chromosome-level genome assembly of the Glanville fritillary butterfly using SMRT sequencing and a linkage map, increasing the assembly size by 94 Mb.

The paper investigates associations between gut microbiome composition and risk/prodromal markers of Parkinson's disease in elderly participants.