User-friendly analysis of droplet array images
Immanuel Sanka, Simona Bartkova, Pille Pata…·Ott Scheler
The paper introduces user-friendly analytical pipelines for droplet array analysis using open-source tools and a custom visualization tool.
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Tallinn University of TechnologyORCID 0000-0002-6795-7734Unclaimed ORCID profile · follow to get notified of new preprints
4 papers
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Immanuel Sanka, Simona Bartkova, Pille Pata…·Ott Scheler
The paper introduces user-friendly analytical pipelines for droplet array analysis using open-source tools and a custom visualization tool.
Bilena L.B. Almeida, Mohamed N. M. Bahrudeen, Vatsala Chauhan…·Andre Sanches Ribeiro
The paper examines how changes in RNA polymerase concentration affect gene expression in E. coli, finding that mid-term responses correlate with transcription factor network topology.
Immanuel Sanka, Simona Bartkova, Pille Pata…·Ott Scheler
This paper evaluates four free image analysis software for droplet detection, finding that objective-type software is more suitable for non-experienced users, with CellProfiler offering the best user experience.
Daniel Blande, Olli‐Pekka Smolander, Virpi Ahola…·Marjo Saastamoinen
The paper improves the chromosome-level genome assembly of the Glanville fritillary butterfly using SMRT sequencing and a linkage map, increasing the assembly size by 94 Mb.