Author

Joseph Isaac Bailey

Northwestern UniversityORCID 0000-0002-4225-3108Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Research Focus:differential expression· 3 Organism:human· 3 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:cell-cell communication· 2 Approach:statistical model· 2 Assay:flow cytometry· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Alexander V. MishariniD· 3 shared Estefani DiaziD· 3 shared G. R. Scott BudingeriD· 3 shared Hiam Abdala‐ValenciaiD· 3 shared Karolina J. SenkowiD· 3 shared Rogan A. GrantiD· 3 shared Ziyan LuiD· 3 shared Amy LudwigiD· 2 shared

Activity by Year

2024-2024 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersImmunology

Alexander V. MisharinORCID

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3 papers

Recent·Most cited

ImmunologyNature ImmunologyPeer-reviewedOct 4, 2024

Expansion of profibrotic monocyte-derived alveolar macrophages in patients with persistent respiratory symptoms and radiographic abnormalities after COVID-19

Joseph Isaac Bailey, Connor H. Puritz, Karolina J. Senkow…·Marc A. Sala

The paper identifies profibrotic monocyte-derived alveolar macrophages and neutrophil recruitment as drivers of lung fibrosis in patients with persistent respiratory symptoms and radiographic abnormalities after COVID-19.

76 citationstop 1%

humanflow cytometry

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Systems BiologyNature ImmunologyPeer-reviewedAug 13, 2024

A distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia

Nikolay S. Markov, Ziyou Ren, Karolina J. Senkow…·Karen M. Ridge

The paper examines alveolar T cell responses in SARS-CoV-2 pneumonia patients, finding that early interferon signaling and targeting of structural proteins correlate with better clinical outcomes.

17 citationstop 3%

humanbulk RNA-seq

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ImmunologyJCI InsightPeer-reviewedMar 19, 2024

Prolonged exposure to lung-derived cytokines is associated with inflammatory activation of microglia in patients with COVID-19

Rogan A. Grant, Taylor A. Poor, Lango Sichizya…·G. R. Scott Budinger

The paper shows that prolonged exposure to lung-derived cytokines in COVID-19 patients activates microglia, and corticosteroids reduce this inflammatory response.

27 citationstop 3%

humanbulk RNA-seq

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