Author

Blaine A. Harlan

Cornell UniversityORCID 0000-0002-5559-3881Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Research Focus:cell type annotation· 3 Organism:mouse· 3 Research Focus:differential expression· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:clustering· 1 Approach:deep learning· 1

Frequent Co-Authors

Alexander Yu. NikitiniD· 2 shared Andrea Flesken‐NikitiniD· 2 shared Benjamin D. CosgroveiD· 2 shared Christopher S. AsheiD· 2 shared Coulter Q. RalstoniD· 2 shared Dah‐Jiun FuiD· 2 shared Abigail M. BenvieiD· 1 shared Amanda P. ArmstrongiD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 34 mutual co-author links

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2 shared papersCancer Biology

Alexander Yu. NikitinORCID

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3 papers

Recent·Most cited

Cancer BiologybioRxivPreprintMar 30, 2026

Comparative single-cell atlases reveal injury-driven tubal epithelial regeneration as a window for ovarian carcinoma initiation

Coulter Q. Ralston, Andrea Flesken‐Nikitin, Dah‐Jiun Fu…·Alexander Yu. Nikitin

The paper compares single-cell transcriptomes of mouse and human tubal epithelium to show injury-driven regeneration in humans may contribute to ovarian cancer initiation.

DOI 10.64898/2026.03.26.714557

mousehuman

𝕏 PostBluesky

Cancer BiologyNature CommunicationsPeer-reviewedOct 4, 2024

Pre-ciliated tubal epithelial cells are prone to initiation of high-grade serous ovarian carcinoma

Andrea Flesken‐Nikitin, Coulter Q. Ralston, Dah‐Jiun Fu…·Alexander Yu. Nikitin

The paper identifies pre-ciliated tubal epithelial cells as a cancer-prone state in high-grade serous ovarian carcinoma by analyzing mouse uterine tube cell states and lineage dynamics.

25 citationstop 4%

mousebulk RNA-seq

𝕏 PostBluesky

GenomicsCommunications BiologyPeer-reviewedJun 14, 2022

Remodeling of gene regulatory networks underlying thermogenic stimuli-induced adipose beiging

Seo Yeon Lee, Abigail M. Benvie, Hui Gyu Park…·Paul D. Soloway

This study identifies common and distinct chromatin accessibility changes in adipose tissue from mice exposed to cold or Adrb3 agonists, revealing unique functional consequences of these stimuli on lipid composition and thermogenesis.

22 citations

mousescATAC-seq

𝕏 PostBluesky