Geetu Tuteja

celltypeEnrich annotates scRNA-seq clusters using consensus enrichment from 26 reference datasets, achieving 62-72% accuracy across three tissues and two species.

This study identifies PPARG as a critical regulator of trophoblast cell differentiation and uterine-placental interface formation in both human and rat models.

This paper develops a conditional rat model to study invasive trophoblast cell lineage regulation and its role in uterine spiral artery remodeling.

The paper compares chromatin accessibility and gene regulatory networks in invasive trophoblast cells between rat and human to identify conserved regulatory mechanisms.

The paper introduces an unsupervised contrastive learning method for ATAC-seq peak calling that outperforms existing methods using replicates and annotations.

This study identifies novel regulators of placental development by analyzing time series RNA-seq data and gene interaction networks in mouse fetal placenta.

This study identifies conserved transcriptomic features of invasive trophoblast cells in rat and human placentation, providing insights into shared regulatory mechanisms essential for healthy pregnancy.

The paper identifies a long-range chromatin interaction that regulates Satb1 expression in trophoblast stem cells through ELF5 and SATB protein interactions.