Bairong Shen

This study benchmarks single-cell drug response models across 26 datasets, showing performance varies with dataset type, imbalance, and model design, with scDEAL showing competitive results.

MSICKB curates MSI-related data from 492 publications to characterize molecular heterogeneity and identify biomarkers for precision oncology in MSI cancers.

This study identifies evolutionarily new genes in humans with disease phenotypes, showing their enrichment in male reproductive diseases and adaptive traits like brain size and color vision.

This paper conducts a bibliometric and temporal trend analysis of Nipah virus research, revealing increased publication rates and highlighting gaps in drug and vaccine development.

The study uses nanopore sequencing to analyze structural variations in rhesus macaques, finding more SVs on the X chromosome and evidence of positive selection.

CTRR-ncRNA is a knowledgebase of non-coding RNAs associated with cancer resistance and recurrence, providing clinical and biomarker information for research and predictive modeling.

This study uses simulation and sequencing data to show that multiple SARS-CoV-2 variants can coexist in COVID-19 patients, with an increase in the number of coinfected variants over time.

The paper introduces a method to reconstruct disease-associated protein-protein interaction networks using comprehensive influence analysis, outperforming existing methods and applying it to prostate cancer and Parkinson's disease.