Author

Shikhi Baruri

University of LouisvilleORCID 0009-0002-3271-2910Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:fungi (other)· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:development & morphogenesis· 1 Approach:experimental assay· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Joseph P. Ham· 2 shared Michael H. PerliniD· 2 shared Alice NamiasiD· 1 shared Alodie SnirciD· 1 shared Alycia C. R. LackeyiD· 1 shared Amandine CornilleiD· 1 shared Amandine Labat· 1 shared Elise A. LucotteiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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2 shared papersPathology

Joseph P. Ham

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2 papers

Recent·Most cited

PathologyJournal of FungiPeer-reviewedAug 28, 2026

Comparative analysis of lifecycle-dependent A to I RNA editing in three members of the Microbotryum violaceum fungal complex

Shikhi Baruri, Nasara Shamsudeen, Alycia C. R. Lackey…·Michael H. Perlin

This study characterizes A-to-I RNA editing across lifecycle stages in three Microbotryum violaceum fungal species, identifying stage-specific and strain-specific editing patterns and their potential functional implications.

DOI 10.3390/jof12090641

fungi (other)bulk RNA-seq

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Evolutionary BiologyNature CommunicationsPeer-reviewedMay 28, 2025

Repeated loss of function at HD mating-type genes and of recombination suppression without mating-type locus linkage in anther-smut fungi

Elise A. Lucotte, Paul Jay, Quentin Rougemont…·Tatiana Giraud

The paper shows that HD mating-type genes have lost function in three Microbotryum species, with PR genes controlling mating compatibility, and reports evolutionary strata from recombination suppression.

13 citations

fungi (other)whole-genome sequencing

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