Author

Riju Dey

Tata Institute of Fundamental ResearchORCID 0009-0002-8262-9453Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Riju Dey1 paper · Tata Institute of Fundamental Research

Biology Disciplines

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Plant Biology· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:chromatin & epigenetic regulation· 2 Assay:DNA methylation· 2 Approach:experimental assay· 2 Organism:plant (other)· 2 Research Focus:development & morphogenesis· 1 Research Focus:gene regulatory network inference· 1 Approach:genetic perturbation / CRISPR· 1 Approach:statistical model· 1

Frequent Co-Authors

Padubidri V. ShivaprasadiD· 2 shared Aravind Madhu· 1 shared Avik Kumar Pal· 1 shared Kousik Kr. Mondal· 1 shared Pritha BhattacharjeeiD· 1 shared S. K. RanaiD· 1 shared Shuvam BanerjeeiD· 1 shared Sohan Seal· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 15 mutual co-author links

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2 shared papersPlant Biology

Padubidri V. ShivaprasadORCID

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3 papers

Recent·Most cited

Plant BiologybioRxivPreprintFeb 25, 2026

Distinct development-associated roles of rice histonevariant H2A.X in suppressing deposition of activeH3K4me3 marks and in restricting H2A.W incorporation

Aravind Madhu, Vivek Hari-Sundar Gandhivel, Steffi Raju…·P. V. Shivaprasad

This study identifies new roles of H2A.X in regulating histone marks during rice development, showing its suppression of H3K4me3 and restriction of H2A.W incorporation.

DOI 10.64898/2026.02.24.707635

plant (other)DNA methylation

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Plant BiologyPLoS GeneticsPeer-reviewedDec 1, 2025

Loss of function of chromatin remodeler OsCLSY4 leads to RdDM-mediated mis-expression of endosperm-specific genes affecting grain qualities

Avik Kumar Pal, S. K. Rana, Riju Dey, Padubidri V. Shivaprasad

This study shows that OsCLSY4 loss of function disrupts endosperm development and gene expression by affecting RdDM-mediated silencing in rice.

5 citations

plant (other)DNA methylation

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BioinformaticsJournal of Medical VirologyPeer-reviewedAug 11, 2020

Mutational spectra of SARS-CoV-2 orf1ab polyprotein and Signature mutations in the United States of America

Shuvam Banerjee, Sohan Seal, Riju Dey…·Pritha Bhattacharjee

The paper analyzes mutations in the SARS-CoV-2 orf1ab polyprotein from US patients, identifying unique and shared mutations that may affect viral function and therapeutic design.

57 citations

virusstatistical model

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