bioRxivImmunologyPreprint
miR-34c-5p is a novel regulator of T cell differentiation that targets FOXP3
Cláudia Noronha-EstimaiD, Raquel Gaspar-LutaiD, Tomás Faria AraújoiD, Carolina Ferreira-FernandesiD, Gil Poiares‐OliveiraiD, Margarida Paulo-PedroiD, Madalena Pimentel MarquesiD, Ana E. SousaiD, Margarida Gama‐CarvalhoiD
Abstract
MicroRNAs regulate key genes and pathways essential for T cell differentiation and function; however, many remain poorly characterized. We previously identified miR-34c-5p as a T cell receptor-inducible microRNA in naive CD4 T cells, but its role in immune regulation remained largely unexplored. In this study, we mapped miR-34c expression across multiple sort-purified CD4 T cell subsets and found that its induction is restricted to FOXP3 cells, both natural regulatory T cells (Tregs) and cells undergoing inducible Treg (iTreg) differentiation trajectory. miR-34c expression correlates with high FOXP3 levels and is absent in conventional memory effector subsets. Functional studies using miR-34c antagomiRs reveal that miR-34c limits iTreg differentiation by restraining FOXP3 expression. Mechanistically, we show that FOXP3 activates miR-34c transcription through direct binding to its promoter, while miR-34c targets the FOXP3 3'UTR, establishing a negative feedback loop. Together, our findings identify miR-34c as a FOXP3-responsive miRNA that fine-tunes iTreg development via post-transcriptional repression of FOXP3, uncovering a novel layer of regulatory control in T cell responses.
- organism: human
- assay: bulk RNA-seq
- research focus: cell type annotation
- research focus: gene regulatory network inference
- approach: experimental assay
- Citations
- 0
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Intronic miR342 is a master regulator of cellular glycolysis in Foxp3+ regulatory CD4 T cells
- An essential role for miR-15/16 in Treg suppression and restriction of proliferation
Kristina Johansson, John D Gagnon, … Karl Mark Ansel·Cell ReportsPeer-reviewed·Oct 1, 2023
- Dissection of the microRNA transcriptomes of CD4+ T cell subsets in autoimmune inflammation identifies novel regulators of disease pathogenesis
Carolina Cunha, Paula Vargas Romero, … Anita Quintal Gomes·bioRxiv·Jun 23, 2025
- A temporally dynamic Foxp3 autoregulatory transcriptional circuit controls the effector Treg programme
D. Bending, A. Paduraru, … M. Ono·bioRxiv·Jan 10, 2018
- Dynamic expression of Id3 defines the stepwise differentiation of tissue-resident regulatory T cells
J. M. Sullivan, B. Höllbacher, D. Campbell·bioRxiv·Oct 17, 2018
- Foxp3 depends on Ikaros for control of regulatory T cell gene expression and function
R. M. Thomas, M. C. Pahl, … A. D. WELLS·bioRxiv·May 23, 2023