Sign in
BioinformaticsNature Structural & Molecular Biology
Peer-reviewed journal article

AlphaSync is an enhanced AlphaFold structure database synchronized with UniProt

Benjamin LangiD, Bálint MészárosiD, Besian I. Sejdiu, Jaimin N PateliD, M. Madan BabuiD

Abstract

Synchronizing protein structure predictions with sequence databases is crucial for their accuracy. We developed AlphaSync (alphasync.stjude.org), a pipeline and database that provides updated AlphaFold structure models for currently 39,961 UniProt proteins, including isoforms. Moreover, AlphaSync enhances 2.6 million structures with residue-level features, including solvent accessibility, dihedral angles, intrinsic disorder predictions, and 4.7 billion atom-level noncovalent contacts. AlphaSyncs user-friendly interface enables structural analyses at scale across up-to-date proteomes for 42 species.

PDFDOI

02 /Specification & Classification

Click any tag to browse matching papers

Reproducibility ledger

Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.

Sign in to file a reproducibility report.

Similarity Map
SelectedSame fieldCross-field
THISProcházka '24Molodenskiy '25Tsitsa '25Barone '25Lee '22Wang '26
69% semantic matchBioinformatics
David Procházka, Terézia Slanináková, Jaroslav Oľha+8 more·bioRxiv·Feb 15, 2024· 2 citations