A Characterization of Axolotl Digit Regeneration: Conserved Mechanisms, Divergent Patterning, and a Critical Role for Hedgehog Signaling
Jackson R. Griffiths, Melissa Miller, Timothy J. Duerr…·James R. Monaghan
Topic · Molecular Biology · Biochemistry, Genetics and Molecular Biology
OpenAlex topic; a paper is listed when OpenAlex scores it at least 0.5 for this topic.
215 papers
Jackson R. Griffiths, Melissa Miller, Timothy J. Duerr…·James R. Monaghan
Vikram Chandra, Samantha Elizabeth Tseng, Allison P Kann…·Mansi Srivastava
This study characterizes the reproductive anatomy, development, regeneration, and behavior of the acoel worm Hofstenia miamia, revealing size-dependent growth rules and long-term sperm storage and self-fertilization capabilities.
Samantha Finkbeiner, Ansa Brew-Smith, X. B. Wang…·Calina Copos
The paper develops a hybrid agent-based model to simulate limb blastema formation, identifying epithelial softening and Wnt signaling as key factors in regeneration.
Danielle Ireland, Evangeline Coffinas, Christina Rabeler, Eva‐Maria S. Collins
This study evaluates the use of planarians as a model for detecting seizurogenic chemicals, showing that several mammalian seizurogens induce seizure-like behavior in two planarian species.
Gabriela Johnson, Andrew Hart, Markus Sujansky…·James W. Godwin
This paper develops and compares two cell-ablation systems in axolotls to study macrophage roles in regeneration, finding macrophages are essential for skeletal and nervous system repair.
Bryanna Isela-Inez Canales, Hunter O. King, Peter W. Reddien
This study shows that map3k1 is essential for restricting progenitor differentiation to specific locations in planarians, preventing ectopic differentiation and tumor formation.
Sakiya Yamamoto, Saya Furukawa, Ayaka Ohashi…·Akira Satoh
This study shows that dorsoventral contact is necessary for Shh induction in axolotl limb regeneration, with dorsal and ventral signals driving pattern formation.
Jinghui Liu, Elisa Nerli, Charlie Duclut…·Rita Mateus
The paper identifies injury-induced electrochemical coupling between tissue depolarization and intracellular signaling as essential for organ regeneration in zebrafish.
Alicia A. Boyd, Elaine C. Seaver
This study shows that Capitella teleta larvae can regenerate lost structures only after metamorphosis into juveniles, suggesting metamorphosis enables regeneration.
Mallory L. Cathell, Mohamad A Auwal, Sarai Alvarez Zepeda…·Ricardo M. Zayas
The paper investigates how soxB1-2 influences chromatin dynamics and gene expression during planarian neurogenesis using ATAC-seq and RNA-seq.
Vivian Jou, Scott D. Semelsberger, Jack Smerczynski, Jessica A. Lehoczky
This study uses single-cell RNA sequencing to identify fibroblast subpopulations and genes linked to fibrosis and regeneration, then tests their effects using AAV gene delivery in mouse digits.
Kai Han, Yuxiaofei Wang, Yao Li…·Mengyang Xu
This study constructs a 4D spatiotemporal transcriptomic map of planarian regeneration using Stereo-seq, identifying dynamic gradients and an injury-induced regenerative zone.
Haleigh Brownlee, Amit Dubey, Nirurita Mahadev…·Blair W. Benham-Pyle
The paper shows that activin/TGF-beta signaling inhibits regeneration after radiation in planarians, but its depletion restores regeneration by increasing stem cell proliferation despite DNA damage.
Anastasia Polikarpova, Inés Rivero-García, Tobias Gerber…·Elly Margaret Tanaka
The paper identifies molecular differences between regenerating blastema and non-regenerating CSD in axolotl limbs and uses Wnt3a expression to induce cartilage bridging in CSD.
Lauren F. Kunselman, Elaine C. Seaver
This study shows that regeneration potential varies along the anterior-posterior axis in Capitella teleta, with posterior fragments regenerating more completely than anterior ones.
Alexandra Y. Shalaeva, Виталий Владиславович Козин
This study investigates FGF signaling's role in caudal regeneration in the annelid Alitta virens, finding it essential for blastema induction but not posteriorization, with conserved mesodermal patterning functions.
Heather K. Le Bleu, Rea G. Kioussi, Astra L. Henner…·Kryn Stankunas
The paper identifies voltage-gated calcium channels as regulators of zebrafish fin regeneration, showing their role in controlling outgrowth scale through Ca2+ fluxes.
Ennis W. Deihl, C. Booth, Erin L. Davies
This paper describes a protocol for using RNA interference in planarian embryos to study gene function during regeneration.
Ryan A McCubbin, Mohammad A Auwal, Shengzhou Wang…·Ricardo M. Zayas
This study identifies Smed-pou4-2 as a regulator of mechanosensory neuron regeneration and function in planarians, showing its role in maintaining sensory identity and behavior.
Arsh Jha, Janani Ramkumar, Aarush Jugdar, Xiuxia Du
This study shows that memory capability persists after neuronal regeneration in planarians but memory quality decreases following oxidative stress-induced neuronal damage.
Duygu Payzin‐Dogru, Tim Froitzheim, Steven J. Blair…·Jessica L. Whited
This paper shows that adrenergic signaling coordinates systemic and local stem cell activation after amputation in axolotls, enhancing regeneration.
Phoebe A. Chapman, Robert C. Day, Daniel Hudson…·Caroline W. Beck
The paper shows that Gram-positive skin bacteria and Tlr2 signaling influence tail regeneration in Xenopus laevis tadpoles by promoting regenerative programs over wound healing.
Elise McCollough Nanista, Landon Elizabeth Poythress, Isabell Reese Skipper…·Tania Rozario
This study identifies head-derived signals that regulate regeneration competence in Hymenolepis diminuta by balancing pro- and anti-regeneration cues from the germinative region.
Zoe Atzin Velasquillo Ramirez, Viktor V. Starunov, Louis Paré…·Eve Gazave
The paper compares regeneration of two complex structures in Platynereis, finding shared and distinct molecular, cellular, and morphological features in their regenerative processes.
Katarzyna Tratkiewicz, Ludwik Gąsiorowski
The paper describes a spontaneous developmental error in flatworms leading to double-headed worms with reversed body axis polarity, which can regenerate normally.
Akansha Pal, Ankit Ved Arora, Bharti Jaiswal…·Ashish K. Gupta
This study identifies TIP60 as essential for wound response in planarians through its role in stem cell maintenance and regeneration.
Nikhil Kumar Jaligam, Mohamed Mohamed Haroon, M. Basu…·Dasaradhi Palakodeti
The paper identifies ddx43+ cells as regulators of slow-cycling neoblasts in planaria using single-cell transcriptomics and functional analyses.
Skylar E. Settles, Kathleen E. Miller, Rachel H. Roberts-Galbraith
This study identifies a parenchymal niche composed of abracada cells that regulate pluripotent stem cell function and regeneration in planarians.
Ishant Tiwari, Hiteshri Chudasama, Harry Tuazon, M. Saad Bhamla
This study investigates how adhesion and injury cues influence the predation of blackworms by planarians, showing that adhesion prevents escape and injury cues may signal prey.
Haruka Matsubara, Takeshi Inoue, Kiyokazu Agata
The paper shows that Fgf induces ECM degradation via Mmps expression in frogs, promoting joint regeneration through BMP secretion and blastema cell activity.