Author

A. Katko

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:mouse· 1 Assay:scATAC-seq· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

A. Barski· 1 shared A. Bergstrom· 1 shared A. Godarova· 1 shared A. T. Bejjani· 1 shared A. Thomas· 1 shared C. A. Chougnet· 1 shared C. Bethel· 1 shared C. Miller· 1 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperImmunology

A. Barski

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

An atlas of gene regulatory networks for memory CD4+ T cells in youth and old age

J. A. Wayman, A. Thomas, A. T. Bejjani, A. Katko, M. Almanan, A. Godarova, S. Korinfskaya, T. A. Cazares, M. Yukawa, L. C. Kottyan, A. Barski, C. A. Chougnet, D. A. Hildeman, E. R. Miraldi

The paper constructs an atlas of gene regulatory networks for memory CD4+ T cells in young and old mice, revealing age-related changes in transcription factor control and cell-cell communication.

bioRxiv · Mar 7, 2023 · PreprintImmunology

A non-canonical metal center drives activity of the Sediminispirochaeta smaragdinae metallo-β- lactamase SPS-1

Z. Cheng, J. VanPelt, A. Bergstrom, C. Bethel, A. Katko, C. Miller, K. Mason, E. Cumming, H. Zhang, R. Kimble, S. Fullington, S. L. Bretz, J. C. Nix, R. A. Bonomo, D. L. Tierney, , M. W. Crowder

This study characterizes the metallo-β-lactamase SPS-1 from Sediminispirochaeta smaragdinae, revealing a novel metal binding site that challenges inhibitor design.

bioRxiv · Jun 2, 2018Biochemistry