Author

C. Semper

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Microbiology· 3 Cell Biology· 1 Ecology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 3 Assay:protein structure· 2 Research Focus:protein structure prediction· 2 Assay:proteomics· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1

Frequent Co-Authors

A. Savchenko· 4 shared P. J. Stogios· 2 shared A. Godzik· 1 shared A. J. Savchenko· 1 shared A. Nikkhah· 1 shared A. Takkouche· 1 shared A. Tsang· 1 shared A. W. Ensminger· 1 shared

Activity by Year

2020-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

4 shared papersMicrobiology

A. Savchenko

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Global survey of secondary metabolism in Aspergillus niger via activation of specific transcription factors

C. Semper, T. T. M. Pham, S. Ram, S. Palys, G. Evdokias, J.-P. Ouedraogo, M.-C. Moisan, N. Geoffrion, I. Reid, M. Di Falco, Z. Bailey, A. Tsang, I. Benoit-Gelber, A. Savchenko

The paper identifies novel secondary metabolites in Aspergillus niger by overexpressing transcription factors linked to cryptic biosynthetic gene clusters.

bioRxiv · Jul 18, 2024Microbiology

Global atlas of predicted functional domains in Legionella pneumophila Dot/Icm translocated effectors

D. T. Patel, P. J. Stogios, L. Jaroszewski, M. L. Urbanus, M. Sedova, C. Semper, C. Le, A. Takkouche, K. Ichii, J. Innabi, D. H. Patel, A. W. Ensminger, A. Godzik, A. Savchenko

The paper provides a global atlas of predicted functional domains in Legionella pneumophila effectors using 3D structure prediction, identifying novel domains and demonstrating their functional impact.

bioRxiv · May 9, 2024Microbiology

Environmental life cycle assessment of recombinant growth factor production for cultivated meat applications

K. R. Trinidad, R. Ashizawa, A. Nikkhah, C. Semper, C. Casolaro, D. Kaplan, A. Savchenko, N. Tichenor-Blackstone

This study uses life cycle assessment to evaluate the environmental impacts of producing recombinant growth factors for cultivated meat, finding significant global warming potentials for each factor.

bioRxiv · Jun 1, 2023Ecology

Recombinant production of growth factors for application in cell culture

M. Venkatesan, C. Semper, R. Di Leo, N. Mesa, P. J. Stogios, A. J. Savchenko

This paper presents a method for producing functional growth factors in E. coli to reduce cell culture medium costs for applications like cultured meat and tissue engineering.

bioRxiv · Feb 15, 2022Cell Biology

Structural characterization of Nonstructural protein 1 from SARS-CoV-2

C. Semper, N. Watanabe, A. Savchenko

The paper reports the crystal structure of SARS-CoV-2 Nsp1 and identifies structural features that inform modeling of related viral proteins.

bioRxiv · Sep 8, 2020Microbiology