BiophysicsbioRxivPreprint
Computing absolute binding affinities by Streamlined Alchemical Free Energy Perturbation (SAFEP)
E. Santiago-McRae, M. Ebrahimi, J. W. Sandberg…·J. Henin
The paper introduces SAFEP, a framework for computing free energy of binding using alchemical free energy perturbation in NAMD, with a practical example on phenol to lysozyme.
DOI 10.1101/2022.12.09.519809