MicrobiologyEuropean Journal of Clinical Microbiology & Infectious DiseasesPeer-reviewed
Metagenomic Next-Generation Sequencing of Rectal Swabs for the Surveillance of Antimicrobial Resistant Organisms on the Illumina Miseq and Oxford MinION Platforms
R. Yee, F. P. Breitwieser, S. Hao…·P. J. Simner
This study evaluates mNGS on Illumina MiSeq and Nanopore MinION platforms for detecting MDRO in rectal swabs, showing concordance with culture results and highlighting advantages of both short and long-read approaches.
DOI 10.1007/s10096-020-03996-4