Author

J. Beane

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 3

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 3 Organism:human· 3 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:cell-cell communication· 2 Approach:experimental assay· 2 Approach:statistical model· 2 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

M. E. Lenburg· 3 shared S. A. Mazzilli· 3 shared G. Liu· 2 shared H. Liu· 2 shared J. D. Campbell· 2 shared K. Krysan· 2 shared S. M. Dubinett· 2 shared S. Zhang· 2 shared

Activity by Year

2018-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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3 shared papersCancer Biology

M. E. Lenburg

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Author profile →

3 papers

Recent·Most cited

Identification of a gene expression signature of vascular invasion and recurrence in stage I lung adenocarcinoma via bulk and spatial transcriptomics

D. Steiner, L. Sultan, T. Sullivan, H. Liu, S. Zhang, A. LeClerc, Y. O. Alekseyev, G. Liu, S. A. Mazzilli, J. Zhang, K. Rieger-Christ, E. J. Burks, J. Beane, M. E. Lenburg

bioRxiv · Jun 7, 2024 · PreprintCancer Biology

Single-cell characterization of subsolid and solid lesions in the lung adenocarcinoma spectrum

J. Yanagawa, L. M. Tran, E. Fung, W. D. Wallace, A. E. Prosper, G. A. Fishbein, C. Shea, R. Hong, B. Liu, R. Salehi-Rad, J. Z. Deng, A. Gower, J. D. Campbell, S. A. Mazzilli, J. Beane, , S. M. Dubinett

The paper uses single-cell RNA sequencing to compare immune and non-immune cell features in subsolid, solid, and non-involved lung tissues, finding reduced cytolytic activity and increased regulatory T cells in subsolid lesions.

bioRxiv · Dec 25, 2020 · PreprintCancer Biology

Molecular Subtyping reveals Immune Alterations associated with Progression of Bronchial Premalignant Lesions

J. Beane, S. A. Mazzilli, J. D. Campbell, G. Duclos, K. Krysan, C. Moy, C. Perdomo, M. Schaffer, G. Liu, S. Zhang, H. Liu, J. Vick, S. S. Dhillon, S. J. Platero, S. M. Dubinett, , A. E. Spira

The paper identifies molecular subtypes of bronchial premalignant lesions and links immune alterations to their progression to lung cancer.

bioRxiv · Sep 12, 2018Cancer Biology