Author

J. E. Spraker

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Biology Disciplines

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Microbiology· 1

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Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Approach:statistical model· 1

Frequent Co-Authors

B. Smith· 1 shared D. A. Baltrus· 1 shared E. Arnold· 1 shared J. P. Shaffer· 1 shared K. L. Hockett· 1 shared M. Clark· 1 shared M. E. Carter· 1 shared

Activity by Year

2021-2021 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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1 shared paperMicrobiology

B. Smith

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1 paper

Recent·Most cited

MicrobiologybioRxivPreprintNov 24, 2021

Transcriptional profiles of a foliar fungal endophyte (Pestalotiopsis, Ascomycota) and its endohyphal bacterium (Luteibacter, Gammaproteobacteria) in co-culture support sulfur exchange and growth regulation

J. P. Shaffer, M. E. Carter, J. E. Spraker…·E. Arnold

This study uses dual RNA-seq to compare gene expression of a foliar fungal endophyte and its endohyphal bacterium in co-culture and axenic conditions, revealing sulfur exchange and potential role of type VI secretion system in symbiosis.

DOI 10.1101/2021.11.24.469969

bulk RNA-seqdeep learning

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